RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 RBM45Q8IUH3 476 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 PLPP6Q8IY26 295 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 LILRA3Q8N6C8 439 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 RELL2Q8NC24 303 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 DDOQ99489 341 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 ADAM11O75078 769 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 KIAA0040Q15053 153 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 SHISA6Q6ZSJ9 500 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TMUB2Q71RG4 321 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 OR4N2Q8NGD1 307 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 PIGCQ92535 297 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HCRTR1O43613 425 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 CHRM2P08172 466 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 GJA4P35212 333 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TAGLN2P37802 199 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 DIO1P49895 249 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HEPHL1Q6MZM0 1159 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 WDR5BQ86VZ2 330 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 PSMF1Q92530 271 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TOE1Q96GM8 510 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 STACQ99469 402 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 PRR14Q9BWN1 585 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 OR52A5Q9H2C5 316 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 FCGR2AP12318 317 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 NME2P22392 152 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 FOLR3P41439 243 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 ECI1P42126 302 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 MANEAQ5SRI9 462 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 POM121Q96HA1 1249 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 LCORQ96JN0 433 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 SLC46A1Q96NT5 459 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 VAMP8Q9BV40 100 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HDAC8Q9BY41 377 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TRAPPC4Q9Y296 219 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 EMC9Q9Y3B6 208 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 RAF1P04049 648 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 RPLP1P05386 114 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TRHRP34981 398 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 HABP2Q14520 560 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 C9orf152Q5JTZ5 239 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 RBMS3Q6XE24 437 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 WDR88Q6ZMY6 472 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TMEFF1Q8IYR6 380 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 C19orf47Q8N9M1 422 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 LYSMD1Q96S90 227 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 BET1LQ9NYM9 111 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 DNMT3BQ9UBC3 853 aaKnown RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 WIF1Q9Y5W5 379 aa13.3□□□□□ -0.28
PRDM16-203ENST00000378391 ARID1BQ8NFD5 2236 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-203ENST00000378391 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZNF816-ZNF321PA0A0X1KG74 233 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 TNFSF12O43508 249 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 PRKRAO75569 313 aaKnown RBP13.29□□□□□ -0.28
PRDM16-203ENST00000378391 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 CA3P07451 260 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZNF93P35789 620 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-203ENST00000378391 DHRS11Q6UWP2 260 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZNF836Q6ZNA1 936 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 FAM213BQ8TBF2 198 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 HLA-CQ95604 372 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 SDSLQ96GA7 329 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 SPACA1Q9HBV2 294 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 TRBV11-1A0A0K0K1C0 115 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ARRDC5A6NEK1 342 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
PRDM16-203ENST00000378391 BDH1Q02338 343 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 IAH1Q2TAA2 248 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ACSM5Q6NUN0 579 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 MARCH5Q9NX47 278 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 MCM3APO60318 1980 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 M0QYG6 137 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 NID1P14543 1247 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZP2Q05996 745 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZNF266Q14584 549 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 TMEM52BQ4KMG9 183 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 PRSS45Q7RTY3 260 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZNF683Q8IZ20 524 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 C10orf111Q8N326 155 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 TSSK2Q96PF2 358 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 PDCD1LG2Q9BQ51 273 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 NUDT22Q9BRQ3 303 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 TMED7-TICAM2A0A0A6YYA0 188 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 AKR7A2O43488 359 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 CTNSO60931 367 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 ZNF17P17021 662 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 EVX1P49640 407 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 MZT1Q08AG7 82 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 MFAP5Q13361 173 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 MED25Q71SY5 747 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 GLCCI1Q86VQ1 547 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 FAM174AQ8TBP5 190 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 SLC6A18Q96N87 628 aa13.29□□□□□ -0.28
PRDM16-203ENST00000378391 USB1Q9BQ65 265 aaKnown RBP13.29□□□□□ -0.28
PRDM16-203ENST00000378391 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms