RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MYEF2Q9P2K5 600 aaKnown RBP14.44□□□□□ -0.1
HMGN4-201ENST00000377575 IL20RAQ9UHF4 553 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 IER3IP1Q9Y5U9 82 aa14.44□□□□□ -0.1
HMGN4-201ENST00000377575 IGLV3-9A0A075B6K5 115 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 A8MV72 311 aaPredicted RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 CRLF1O75462 422 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 KHDRBS3O75525 346 aaKnown RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 KRT36O76013 467 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 TXNDC12O95881 172 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 IGFBP1P08833 259 aaPredicted RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 APEHP13798 732 aaKnown RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 CTLA4P16410 223 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 GIFP27352 417 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 SLC6A6P31641 620 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 GZMKP49863 264 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 FXYD6P3P58550 94 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 SCRN3Q0VDG4 424 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 ENDOGQ14249 297 aaKnown RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 MAD2L1BPQ15013 274 aaPredicted RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 MOGQ16653 247 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 DNM1P34Q6PK57 102 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 ZER1Q7Z7L7 766 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 C1orf174Q8IYL3 243 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 OR1J1Q8NGS3 322 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 POP5Q969H6 163 aaKnown RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 OR52D1Q9H346 318 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 MAGIXQ9H6Y5 334 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 TAAR3PQ9P1P4 343 aa14.43□□□□□ -0.1
HMGN4-201ENST00000377575 NDRG4Q9ULP0 352 aaKnown RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 PRPF19Q9UMS4 504 aaKnown RBP14.43□□□□□ -0.1
HMGN4-201ENST00000377575 IMPA2O14732 288 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 SLC16A7O60669 478 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 MT-ND5P03915 603 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 IGHV4-31P0DP07 118 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 NAT2P11245 290 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 ERVS71-1P61550 626 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 AQP6Q13520 282 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 RFX4Q33E94 735 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 CYB5R2Q6BCY4 276 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 LCN8Q6JVE9 175 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF774Q6NX45 483 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 ARL9Q6T311 187 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 JAZF1Q86VZ6 243 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 DHFR2Q86XF0 187 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 GLB1L2Q8IW92 636 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 LINC00471Q8N535 108 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 ERMAPQ96PL5 475 aaPredicted RBP14.42□□□□□ -0.1
HMGN4-201ENST00000377575 GPA33Q99795 319 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 RERGLQ9H628 205 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 ELOVL3Q9HB03 270 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 EMC7Q9NPA0 242 aa14.42□□□□□ -0.1
HMGN4-201ENST00000377575 LOC100509620A0A075B734 347 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 IGHV4-61A0A0C4DH41 118 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 H3BSA7 217 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 DOK2O60496 412 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 PPP1R3DO95685 299 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 CLPTM1O96005 669 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 COX5BP10606 129 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF16P17020 682 aaPredicted RBP14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF23P17027 643 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 CRABP1P29762 137 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 GCH1P30793 250 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 WNT5AP41221 380 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 MAGEA2P43356 314 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ARHGDIAP52565 204 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 TSPAN31Q12999 210 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 TRIM25Q14258 630 aaKnown RBP14.41□□□□□ -0.1
HMGN4-201ENST00000377575 PCGF3Q3KNV8 242 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ALKBH6Q3KRA9 238 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF718Q3SXZ3 478 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 C1orf94Q6P1W5 598 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 TMEM154Q6P9G4 183 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 PGM2L1Q6PCE3 622 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 RINLQ6ZS11 566 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 PTCHD4Q6ZW05 846 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF101Q8IZC7 436 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 ABHD4Q8TB40 342 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 GNPDA2Q8TDQ7 276 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 IFT27Q9BW83 186 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 C1orf21Q9H246 121 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 HINT3Q9NQE9 182 aaKnown RBP14.41□□□□□ -0.1
HMGN4-201ENST00000377575 LYVE1Q9Y5Y7 322 aa14.41□□□□□ -0.1
HMGN4-201ENST00000377575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.41□□□□□ -0.11e-10■■■□□ 16
HMGN4-201ENST00000377575 JMJD1CQ15652 2540 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 TCRBV5S2A0A599 114 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 TNFRSF11BO00300 401 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 ARPC3O15145 178 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 SGCEO43556 437 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 ICMTO60725 284 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 RENP00797 406 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 SCG5P05408 212 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 NOS3P29474 1203 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 HTR5AP47898 357 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 GSSP48637 474 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 CHN2P52757 468 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 LSM6P62312 80 aaKnown RBP14.4□□□□□ -0.1
HMGN4-201ENST00000377575 MRPS11P82912 194 aaKnown RBP14.4□□□□□ -0.1
HMGN4-201ENST00000377575 FAM98BQ52LJ0 330 aaKnown RBP14.4□□□□□ -0.1
HMGN4-201ENST00000377575 RPL13AP3Q6NVV1 102 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 PGBD2Q6P3X8 592 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms