RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 SH3BGRP55822 239 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-203ENST00000377344 TSC22D1Q15714 1073 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 KCNMB1Q16558 191 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 ANKRD16Q6P6B7 361 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 TMEM154Q6P9G4 183 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF773Q6PK81 442 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 SLC16A14Q7RTX9 510 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 CXorf67Q86X51 503 aaPredicted RBP11.37□□□□□ -0.59
CBWD3-203ENST00000377344 GABRG1Q8N1C3 465 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 RFLNBQ8N5W9 214 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 OTOSQ8NHW6 89 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 CCDC120Q96HB5 630 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 YIPF3Q9GZM5 350 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 COPS3Q9UNS2 423 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 EXOSC1Q9Y3B2 195 aaKnown RBP11.37□□□□□ -0.59
CBWD3-203ENST00000377344 TMEM14AQ9Y6G1 99 aa11.37□□□□□ -0.59
CBWD3-203ENST00000377344 IGHA1P01876 353 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 LSM6P62312 80 aaKnown RBP11.36□□□□□ -0.59
CBWD3-203ENST00000377344 HIKESHIQ53FT3 197 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 FAM27BQ5VT28 67 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 SLC18B1Q6NT16 456 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF474Q6S9Z5 364 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-203ENST00000377344 SPATC1Q76KD6 591 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 DCXRQ7Z4W1 244 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 MRGPRGQ86SM5 289 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 SKA3Q8IX90 412 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 RELL2Q8NC24 303 aaPredicted RBP11.36□□□□□ -0.59
CBWD3-203ENST00000377344 OR1K1Q8NGR3 316 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 ERVK13-1Q9NX77 482 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 GALNT8Q9NY28 637 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 CLEC2DQ9UHP7 191 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 CYB5R1Q9UHQ9 305 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 ERGIC3Q9Y282 383 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 KLHDC2Q9Y2U9 406 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 LHFPL6Q9Y693 200 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 CFAP46Q8IYW2 2715 aa11.36□□□□□ -0.59
CBWD3-203ENST00000377344 TRIM64A6NGJ6 449 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 A8MXE2 369 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 PSMD9O00233 223 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 MYL12BO14950 172 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 PATE4P0C8F1 98 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 CHRNB4P30926 498 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 HOXC12P31275 282 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 MAP2K4P45985 399 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ADORA2A-AS1P86434 159 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF85Q03923 595 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ENDOGQ14249 297 aaKnown RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 P2RY6Q15077 328 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 NRN1LQ496H8 165 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 C4orf17Q53FE4 359 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 TEX30Q5JUR7 227 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SSX6Q7RTT6 188 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SPARTQ8N0X7 666 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF433Q8N7K0 673 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF454Q8N9F8 522 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SNX33Q8WV41 574 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 FBXO17Q96EF6 278 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 MNTQ99583 582 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ALG8Q9BVK2 526 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 CDCA4Q9BXL8 241 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 RNF121Q9H920 327 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 INPP5EQ9NRR6 644 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ERRFI1Q9UJM3 462 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 GDF2Q9UK05 429 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 POLEQ07864 2286 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 PHYHO14832 338 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 RER1O15258 196 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 MAGEB4O15481 346 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 MRPS14O60783 128 aaKnown RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 CST2P09228 141 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 LIMS3P0CW19 117 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 LIMS4P0CW20 117 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ALOX5APP20292 161 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 COX5AP20674 150 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 AQP6Q13520 282 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 GALEQ14376 348 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 PCK2Q16822 640 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 TBRG1Q3YBR2 411 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SFRP5Q5T4F7 317 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 MTFR2Q6P444 385 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF322Q6U7Q0 402 aaPredicted RBP11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ZNF627Q7L945 461 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SVOPQ8N4V2 548 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SIGLEC11Q96RL6 698 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 AMELYQ99218 206 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 ABHD6Q9BV23 337 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 C1orf198Q9H425 327 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 SCOCQ9UIL1 159 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 IKZF2Q9UKS7 526 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 NBASA2RRP1 2371 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 RELNP78509 3460 aa11.35□□□□□ -0.59
CBWD3-203ENST00000377344 A0A1W2PR80 420 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 FAM90A27PA6NNH2 459 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 HLA-HP01893 362 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 CD79AP11912 226 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 IL32P24001 234 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 UBE2NP61088 152 aaKnown RBP11.34□□□□□ -0.59
CBWD3-203ENST00000377344 PCBD1P61457 104 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 TUBA1BP68363 451 aa11.34□□□□□ -0.59
CBWD3-203ENST00000377344 TUBA4AP68366 448 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms