RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 PNLIPRP2P54317 469 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 ALKBH6Q3KRA9 238 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 DPPA2Q7Z7J5 298 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 NLRP8Q86W28 1048 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR51A2Q8NGJ7 313 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR10J5Q8NHC4 309 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 PDCD1LG2Q9BQ51 273 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 TRBV5-4A0A0C4DH59 114 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 A6NHS1 94 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 UPK1AO00322 258 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 FCMRO60667 390 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CLEC3BP05452 202 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 RPL18Q07020 188 aaKnown RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 CAMKMTQ7Z624 323 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 NOXA1Q86UR1 476 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 TMEM102Q8N9M5 508 aaPredicted RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 MRGPRX4Q96LA9 322 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 TEAD3Q99594 435 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 SHARPINQ9H0F6 387 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 SERGEFQ9UGK8 458 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A8P0DMV1 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A9P0DMV2 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 ACHEP22303 614 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A2Q5DJT8 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 FAM199XQ6PEV8 388 aaPredicted RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR10X1Q8NGY0 326 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 OLIG1Q8TAK6 271 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 SLCO4A1Q96BD0 722 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 MED29Q9NX70 200 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 CRYABP02511 175 aaKnown RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 GLRA1P23415 457 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR52N1Q8NH53 320 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR51F2Q8NH61 342 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 TCTEX1D2Q8WW35 142 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 GATA6Q92908 595 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 HMX2A2RU54 273 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR6C65A6NJZ3 312 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 SIRPB1O00241 398 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 GMDSO60547 372 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 SLC2A10O95528 541 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 ACSM1Q08AH1 577 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 WDR88Q6ZMY6 472 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 OR10K1Q8NGX5 313 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 BCO1Q9HAY6 547 aa12.42□□□□□ -0.42
GPC6-201ENST00000377047 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 LOC107986453A0A1B0GWG9 222 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 CBR3O75828 277 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 GNB3P16520 340 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 SRPXP78539 464 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 EMC4Q5J8M3 183 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 NT5CQ8TCD5 201 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 HRH4Q9H3N8 390 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 HEYLQ9NQ87 328 aaPredicted RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 KIAA0100Q14667 2235 aaKnown RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 E9PI62 339 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 SSTR2P30874 369 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 PLA2G7Q13093 441 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 STEAP1BQ6NZ63 245 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 OR11G2Q8NGC1 345 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 SEC22AQ96IW7 307 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 KCNJ15Q99712 375 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 QPCTLQ9NXS2 382 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 A0A087WZY1 265 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 M0R135 149 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 SH2D1BO14796 132 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 ZNF799Q96GE5 643 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 POLDIP2Q9Y2S7 368 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 FZD6O60353 706 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 OR8U8P0C7N1 319 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 PIGAP37287 484 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 MRPS34P82930 218 aaKnown RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 TATDN3Q17R31 274 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 KDM4DQ6B0I6 523 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 DND1Q8IYX4 353 aaKnown RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 KISS1RQ969F8 398 aaPredicted RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 ETHE1O95571 254 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 SDHBP21912 280 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 HBG1P69891 147 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 HBG2P69892 147 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 FAM109BQ6ICB4 259 aaPredicted RBP12.41□□□□□ -0.42
GPC6-201ENST00000377047 ARIH2OSQ8N7S6 290 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 REEP6Q96HR9 211 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 OR2M2Q96R28 347 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 PFDN5Q99471 154 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 ACER3Q9NUN7 267 aa12.41□□□□□ -0.42
GPC6-201ENST00000377047 SPI1P17947 270 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 LAP3P28838 519 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 THBS3P49746 956 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 SNRPGP62308 76 aaKnown RBP12.4□□□□□ -0.42
GPC6-201ENST00000377047 FOXF1Q12946 379 aa12.4□□□□□ -0.42
GPC6-201ENST00000377047 PEA15Q15121 130 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms