RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 EXO1Q9UQ84 846 aaKnown RBP16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 UBL3O95164 117 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 ERP29P30040 261 aaKnown RBP16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 FMODQ06828 376 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 PPA1Q15181 289 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 LTC4SQ16873 150 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 EMC4Q5J8M3 183 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 ARSKQ6UWY0 536 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 OR8D4Q8NGM9 314 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 ELMOD3Q96FG2 381 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 ZC3HAV1LQ96H79 300 aaKnown RBP16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 CRLF2Q9HC73 371 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 RABL2AQ9UBK7 228 aaPredicted RBP16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 RABL2BQ9UNT1 228 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 PIGLQ9Y2B2 252 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 NAP1L6A6NFF2 107 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 KLK10O43240 276 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC22A24Q8N4F4 322 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 DYNC2LI1Q8TCX1 351 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 PCDHGA3Q9Y5H0 932 aa16.26■□□□□ 0.19
PTPDC1-202ENST00000375360 D6RAR5 112 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 TP53P04637 393 aaPredicted RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 SRP9P49458 86 aaKnown RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 C12orf73Q69YU5 71 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 GLIPR1L1Q6UWM5 242 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 OR10K1Q8NGX5 313 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 VSTM2LQ96N03 204 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 PHB2Q99623 299 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 SLCO1C1Q9NYB5 712 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 A0A1B0GV50 99 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 TNFRSF10AO00220 468 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 BET1O15155 118 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 IDH3GP51553 393 aaPredicted RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 CCR6P51684 374 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 AKR1D1P51857 326 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 TAS2R19P59542 299 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 FOXC1Q12948 553 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 ACER2Q5QJU3 275 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 PXKQ7Z7A4 578 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 SIAH3Q8IW03 269 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 D2HGDHQ8N465 521 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 DTX4Q9Y2E6 619 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 SC5DO75845 299 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 B4GALT1P15291 398 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 ELK1P19419 428 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 POU3F3P20264 500 aaPredicted RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 FKBP2P26885 142 aaKnown RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 CDK5R1Q15078 307 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 TRIP6Q15654 476 aaKnown RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 HES3Q5TGS1 186 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 KCNG3Q8TAE7 436 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 HYLS1Q96M11 299 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 OXGR1Q96P68 337 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 NKX3-1Q99801 234 aaPredicted RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 MICU1Q9BPX6 476 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 ABHD6Q9BV23 337 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 RBFOX1Q9NWB1 397 aaKnown RBP16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 PSME4Q14997 1843 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 OTOFQ9HC10 1997 aa16.25■□□□□ 0.19
PTPDC1-202ENST00000375360 CENPVL1A0A0U1RR11 272 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 ALG1L2C9J202 215 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 M0QYG6 137 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 HOXB5P09067 269 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 HOXB9P17482 250 aaPredicted RBP16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 GABRA2P47869 451 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 IKZF1Q13422 519 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 TRA2AQ13595 282 aaKnown RBP eCLIP16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 TPBGQ13641 420 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 INSL4Q14641 139 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 STEAP2Q8NFT2 490 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 VWCEQ96DN2 955 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 C10orf90Q96M02 699 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 IP6K3Q96PC2 410 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 PCDHGA5Q9Y5G8 931 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 GMEB1Q9Y692 573 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 NPIPB8E9PQR5 432 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 CTSBP07858 339 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 EPHA1P21709 976 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 THEM4Q5T1C6 240 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 IDO2Q6ZQW0 420 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 SGPP2Q8IWX5 399 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 OR5AS1Q8N127 324 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 PSMF1Q92530 271 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 LSM5Q9Y4Y9 91 aaKnown RBP16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 OR6C68A6NDL8 312 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 ALDOBP05062 364 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 CLDN6P56747 220 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 CDK5Q00535 292 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 LYSMD2Q8IV50 215 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC25A45Q8N413 288 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 GPR84Q9NQS5 396 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 PSMB1P20618 241 aaKnown RBP16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 HTR2AP28223 471 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 SLC9A3R2Q15599 337 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 TRILQ7L0X0 811 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 SMIM19Q96E16 107 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 RNF170Q96K19 258 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 PRRT1Q99946 306 aa16.24■□□□□ 0.19
PTPDC1-202ENST00000375360 TIMM8AO60220 97 aaPredicted RBP16.23■□□□□ 0.19
PTPDC1-202ENST00000375360 PET100P0DJ07 73 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms