RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 RPL22L1Q6P5R6 122 aaKnown RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 UNQ9370/PRO34162Q6UXP9 181 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 NRROSQ86YC3 692 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 SAT2Q96F10 170 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-203ENST00000375315 GFI1Q99684 422 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 POTEKPQ9BYX7 375 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 HRASLS2Q9NWW9 162 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 ANKRD10Q9NXR5 420 aa11.01□□□□□ -0.65
C9orf3-203ENST00000375315 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 ERI3O43414 337 aaKnown RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 GPRIN2O60269 458 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 IFNA2P01563 188 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CHRM4P08173 479 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CD14P08571 375 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SNRNP70P08621 437 aaKnown RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 F3P13726 295 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PEBP1P30086 187 aaKnown RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 PI4KAP42356 2102 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SSR2P43308 183 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CXCL12P48061 93 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CSNK1G2P78368 415 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 HGFACQ04756 655 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 BIKQ13323 160 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 MST1LQ2TV78 715 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 NSUN5P2Q63ZY6 315 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 LCTLQ6UWM7 567 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SLC2A12Q8TD20 617 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 ISOC2Q96AB3 205 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 HS6ST2Q96MM7 605 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SLC25A21Q9BQT8 299 aaPredicted RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 TTTY10Q9BZA0 68 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 KLHL28Q9NXS3 571 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PISDQ9UG56 409 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CACFD1Q9UGQ2 172 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 TP53TG5Q9Y2B4 290 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 TIMM10BQ9Y5J6 103 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 UNC119BA6NIH7 251 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 ZNF208O43345 1280 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 XRCC3O43542 346 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 YIF1AO95070 293 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PPP1R3DO95685 299 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CD1AP06126 327 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 MELTFP08582 738 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CD81P60033 236 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PRDX1Q06830 199 aaKnown RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 AGERQ15109 404 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 STEAP1BQ6NZ63 245 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 KDF1Q8NAX2 398 aaPredicted RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 OR5T3Q8NGG3 340 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PMM1Q92871 262 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PELI1Q96FA3 418 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SHDQ96IW2 340 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 MENTQ9BUN1 341 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 NCDNQ9UBB6 729 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 TMEM184BQ9Y519 407 aaPredicted RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 RIIAD1A6NNX1 92 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CLDN4O14493 209 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PLPP1O14494 284 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SLC2A1P11166 492 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 BCL6P41182 706 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 RABIFP47224 123 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 KIAA0141Q14154 515 aaPredicted RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 CLINT1Q14677 625 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 TGIF1Q15583 401 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 ZNF750Q32MQ0 723 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 DNLZQ5SXM8 178 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 TGIF2LXQ8IUE1 241 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SYS1Q8N2H4 156 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 OR4K17Q8NGC6 315 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CA5BP1Q8WTZ4 195 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 RSC1A1Q92681 617 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 ARHGDIGQ99819 225 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 PDCD1LG2Q9BQ51 273 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 CMC2Q9NRP2 79 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 ZCCHC3Q9NUD5 404 aaKnown RBP11□□□□□ -0.65
C9orf3-203ENST00000375315 WIF1Q9Y5W5 379 aa11□□□□□ -0.65
C9orf3-203ENST00000375315 SPTY2D1-AS1A0A0U1RR47 76 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 C7orf77A4D0Y5 90 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 CDC42EP2O14613 210 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 CCSO14618 274 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 TBX19O60806 448 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 APBB3O95704 486 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 ZGLP1P0C6A0 271 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 FAM157CP0CG43 387 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 PGAM2P15259 253 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 CD38P28907 300 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 CD80P33681 288 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 PRKAG1P54619 331 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 USF2Q15853 346 aaPredicted RBP10.99□□□□□ -0.65
C9orf3-203ENST00000375315 AMZ1Q400G9 498 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 TMPRSS11FQ6ZWK6 438 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 OR2L3Q8NG85 312 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 OR4K14Q8NGD5 310 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 OR56B1Q8NGI3 324 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 TMEM255BQ8WV15 326 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 COL26A1Q96A83 441 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 ZBTB8AQ96BR9 441 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 SLC41A3Q96GZ6 507 aa10.99□□□□□ -0.65
C9orf3-203ENST00000375315 ZNF559Q9BR84 538 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms