RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ABHD5Q8WTS1 349 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 AURKBQ96GD4 344 aaPredicted RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 WDR92Q96MX6 357 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 PAK1IP1Q9NWT1 392 aaPredicted RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 SLC17A6Q9P2U8 582 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 B3GAT1Q9P2W7 334 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 VPREB3Q9UKI3 123 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 SF3B6Q9Y3B4 125 aaKnown RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 DCDC2BA2VCK2 349 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 RNF212BA8MTL3 300 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 E5RGE8 158 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 K7ERU9 68 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 MAKP20794 623 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 SNRPFP62306 86 aaKnown RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 VMACQ2NL98 169 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 OLIG3Q7RTU3 272 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 CD99L2Q8TCZ2 262 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 U2AF1L4Q8WU68 220 aaKnown RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 TXNDC15Q96J42 360 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 TMPRSS13Q9BYE2 586 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 MIXL1Q9H2W2 232 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 AMBNQ9NP70 447 aa8.09□□□□□ -1.11
UBR4-201ENST00000375218 NKX1-2Q9UD57 310 aaPredicted RBP8.09□□□□□ -1.11
UBR4-201ENST00000375218 AQP7P3A6NL99 342 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 F6UZH7 168 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TP53I11O14683 189 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 RAP2AP10114 183 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ZP4Q12836 540 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PLXDC2Q6UX71 529 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TFAP2EQ6VUC0 442 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 GLT6D1Q7Z4J2 308 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 CPNE9Q8IYJ1 553 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 LGI4Q8N135 537 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 LFNGQ8NES3 379 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ADAMTS17Q8TE56 1095 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 FCRL1Q96LA6 429 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TRIM51Q9BSJ1 452 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 OR1A1Q9P1Q5 309 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TMEM181Q9P2C4 612 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 HHLA2Q9UM44 414 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 SMIM35A0A1B0GVV1 85 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 CLDN9O95484 217 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 CREB1P16220 341 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ANOS1P23352 680 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 MVDP53602 400 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 SNRPEP62304 92 aaKnown RBP8.08□□□□□ -1.12
UBR4-201ENST00000375218 CAV1Q03135 178 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 NFATC3Q12968 1075 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 OXA1LQ15070 435 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PRTGQ2VWP7 1150 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 OGFRL1Q5TC84 451 aaPredicted RBP8.08□□□□□ -1.12
UBR4-201ENST00000375218 AGBL4Q5VU57 503 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PEG10Q86TG7 708 aaKnown RBP8.08□□□□□ -1.12
UBR4-201ENST00000375218 TMPRSS6Q8IU80 811 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ZNF738Q8NE65 137 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 OR4C5Q8NGB2 326 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ASB10Q8WXI3 467 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 IGSF8Q969P0 613 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 H2AFJQ9BTM1 129 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 FAIM2Q9BWQ8 316 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PRO1933Q9H354 126 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PILRBQ9UKJ0 227 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 C21orf140B9A014 251 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 FAM72CH0Y354 149 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 CLDN5O00501 218 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PIAS1O75925 651 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 OR2B3O76000 313 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 WNT2P09544 360 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 DLX5P56178 289 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ZNF415Q09FC8 603 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ST3GAL3Q11203 375 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 HSPB3Q12988 150 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 EMC4Q5J8M3 183 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 FAM72AQ5TYM5 149 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TXNDC8Q6A555 127 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 FAM72DQ6L9T8 149 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ZNF534Q76KX8 674 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 FAM72BQ86X60 149 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 LGI3Q8N145 548 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 SLC26A10Q8NG04 563 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TERB2Q8NHR7 220 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 PINX1Q96BK5 328 aaKnown RBP8.08□□□□□ -1.12
UBR4-201ENST00000375218 ZNF488Q96MN9 340 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 DSN1Q9H410 356 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 TLE6Q9H808 572 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 ZDHHC8Q9ULC8 765 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 HSPE1-MOB4S4R3N1 261 aa8.08□□□□□ -1.12
UBR4-201ENST00000375218 CIB4A0PJX0 185 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 OR5H14A6NHG9 310 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 J3QRK9 145 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 M0R143 59 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 TSPAN13O95857 204 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 DUX4L4P0CJ87 422 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 SSTR1P30872 391 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 LILRA4P59901 499 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 IL13RA1P78552 427 aa8.07□□□□□ -1.12
UBR4-201ENST00000375218 MS4A2Q01362 244 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms