RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 GLYATL3Q5SZD4 288 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 ASPHD2Q6ICH7 369 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 PHOSPHO1Q8TCT1 267 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 PAQR8Q8TEZ7 354 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 CA5BP1Q8WTZ4 195 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 OR1E3Q8WZA6 343 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 SLC22A18Q96BI1 424 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 ZBTB8AQ96BR9 441 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 OR2M4Q96R27 311 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 SLC6A7Q99884 636 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 RSRP1Q9BUV0 290 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 POLE3Q9NRF9 147 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 MSRAQ9UJ68 235 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 KLF2Q9Y5W3 355 aaPredicted RBP12.37□□□□□ -0.43
USP49-201ENST00000373006 OR6C76A6NM76 312 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 OR2AT4A6NND4 320 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 ACTBP60709 375 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 ACTG1P63261 375 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 MEP1BQ16820 701 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 MOGAT2Q3SYC2 334 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 MESTQ5EB52 335 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 EXD3Q8N9H8 876 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 CASTOR1Q8WTX7 329 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 RBM18Q96H35 190 aaKnown RBP12.37□□□□□ -0.43
USP49-201ENST00000373006 CHRDQ9H2X0 955 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 PIGMQ9H3S5 423 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 ELOVL3Q9HB03 270 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 MKL2Q9ULH7 1088 aa12.37□□□□□ -0.43
USP49-201ENST00000373006 ATXN7L1Q9ULK2 861 aaPredicted RBP12.37□□□□□ -0.43
USP49-201ENST00000373006 ZNF736B4DX44 427 aaPredicted RBP12.36□□□□□ -0.43
USP49-201ENST00000373006 EEF1E1-BLOC1S5C9J1V9 151 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 CYB5AP00167 134 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 CD8AP01732 235 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SDHAP31040 664 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 TMEM31Q5JXX7 168 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 H3F3CQ6NXT2 135 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 CBLN3Q6UW01 205 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 KCTD9Q7L273 389 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SPAG16Q8N0X2 631 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 PMM1Q92871 262 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 ZNF524Q96C55 264 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 LPAR4Q99677 370 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 MAP3K3Q99759 626 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 KLHDC3Q9BQ90 382 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 TINAGQ9UJW2 476 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 TMEM235A6NFC5 223 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SERINC4A6NH21 518 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 OIP5O43482 229 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 OR2F2O95006 317 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 PNPP00491 289 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
USP49-201ENST00000373006 PPT1P50897 306 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 OR2F1Q13607 317 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 GPR18Q14330 331 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 PRAMEF17Q5VTA0 474 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 TANGO2Q6ICL3 276 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 C4orf45Q96LM5 186 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 NDRG3Q9UGV2 375 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SLC17A2O00624 439 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 ACTL6AO96019 429 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 CASRP41180 1078 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 PPP1CAP62136 330 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SKP1P63208 163 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 RPL18Q07020 188 aaKnown RBP12.36□□□□□ -0.43
USP49-201ENST00000373006 ZNF74Q16587 644 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 ACOT7LQ6ZUV0 252 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 MDGA2Q7Z553 956 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 FAM219AQ8IW50 185 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SVBPQ8N300 66 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 OR13C8Q8NGS7 320 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 KTI12Q96EK9 354 aaPredicted RBP12.36□□□□□ -0.43
USP49-201ENST00000373006 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 PFDN5Q99471 154 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 CMKLR1Q99788 373 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 SLC25A21Q9BQT8 299 aaPredicted RBP12.36□□□□□ -0.43
USP49-201ENST00000373006 TLNRD1Q9H1K6 362 aa12.36□□□□□ -0.43
USP49-201ENST00000373006 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
USP49-201ENST00000373006 A0A1B0GTI1 187 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 C11orf98E9PRG8 122 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 TGFBR3LH3BV60 316 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 PLGP00747 810 aaPredicted RBP12.35□□□□□ -0.43
USP49-201ENST00000373006 SLC35E2P0CK97 266 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 CXADRP78310 365 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 KIR2DS3Q14952 304 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 SLC22A6Q4U2R8 563 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 OR51A2Q8NGJ7 313 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 VSTM2LQ96N03 204 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 INTS14Q96SY0 518 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 GHRLQ9UBU3 117 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 VSIG4Q9Y279 399 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 APBB3O95704 486 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 ZNF735P0CB33 412 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 C5AR1P21730 350 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 VAMP1P23763 118 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 GJA4P35212 333 aa12.35□□□□□ -0.43
USP49-201ENST00000373006 SLC25A1P53007 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms