RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ZNF416Q9BWM5 594 aa13.89□□□□□ -0.19
TMEM53-204ENST00000372243 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
TMEM53-204ENST00000372243 ZNF696Q9H7X3 374 aa13.89□□□□□ -0.19
TMEM53-204ENST00000372243 EMC7Q9NPA0 242 aa13.89□□□□□ -0.19
TMEM53-204ENST00000372243 INPP5EQ9NRR6 644 aa13.89□□□□□ -0.19
TMEM53-204ENST00000372243 CIB4A0PJX0 185 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 C12orf71A8MTZ7 269 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 LYZL6O75951 148 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 SEC14L2O76054 403 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 ASCL1P50553 236 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 AQP6Q13520 282 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 RNLSQ5VYX0 342 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 KLHL24Q6TFL4 600 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 STAC2Q6ZMT1 411 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 DPPA2Q7Z7J5 298 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 STX19Q8N4C7 294 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 ACBD7Q8N6N7 88 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 USB1Q9BQ65 265 aaKnown RBP13.88□□□□□ -0.19
TMEM53-204ENST00000372243 KCNN2Q9H2S1 579 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 LHFPL6Q9Y693 200 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 PHYHO14832 338 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 RGS10O43665 173 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 RAD51DO75771 328 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 APOL3O95236 402 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 SPARCP09486 303 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 ALOX5APP20292 161 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 EEF1B2P24534 225 aaKnown RBP13.88□□□□□ -0.19
TMEM53-204ENST00000372243 CD79BP40259 229 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 PCBD1P61457 104 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 HIST1H3AP68431 136 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 TBRG1Q3YBR2 411 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 HIST2H3PS2Q5TEC6 136 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 XKRXQ6PP77 449 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 HIST2H3AQ71DI3 136 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 SLC16A14Q7RTX9 510 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 PRSS48Q7RTY5 328 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 SKA3Q8IX90 412 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 LRRC18Q8N456 261 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 OR2AJ1Q8NGZ0 328 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 HTRA1Q92743 480 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 MYCBPQ99417 103 aaPredicted RBP13.88□□□□□ -0.19
TMEM53-204ENST00000372243 SH3GL3Q99963 347 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 CDCA4Q9BXL8 241 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 OR10A4Q9H209 315 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 GALNT8Q9NY28 637 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 ASH2LQ9UBL3 628 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 POLR1DQ9Y2S0 133 aa13.88□□□□□ -0.19
TMEM53-204ENST00000372243 EXOSC1Q9Y3B2 195 aaKnown RBP13.88□□□□□ -0.19
TMEM53-204ENST00000372243 ARPC4-TTLL3A0A0A6YYG9 625 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 ZNF670-ZNF695F2Z2N8 137 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 LYNP07948 512 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 PSKH1P11801 424 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 SLC36A2Q495M3 483 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 SLC18B1Q6NT16 456 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 RHOUQ7L0Q8 258 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 BHLHA15Q7RTS1 189 aaPredicted RBP13.87□□□□□ -0.19
TMEM53-204ENST00000372243 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.87□□□□□ -0.19
TMEM53-204ENST00000372243 EGFL6Q8IUX8 553 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 GJC3Q8NFK1 279 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 OR10H4Q8NGA5 316 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 CA5BP1Q8WTZ4 195 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 NANOS1Q8WY41 292 aaKnown RBP13.87□□□□□ -0.19
TMEM53-204ENST00000372243 FBXO17Q96EF6 278 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 C1orf198Q9H425 327 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 OBP2BQ9NPH6 170 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 ZNF224Q9NZL3 707 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 ERVK-18Q9QC07 812 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 LAMP5Q9UJQ1 280 aa13.87□□□□□ -0.19
TMEM53-204ENST00000372243 RALYQ9UKM9 306 aaKnown RBP13.87□□□□□ -0.19
TMEM53-204ENST00000372243 A0A096LPE4 126 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 A0A1W2PPZ6 126 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 A0A1W2PQL4 384 aaPredicted RBP13.86□□□□□ -0.19
TMEM53-204ENST00000372243 DAPL1A0PJW8 107 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 UBL3O95164 117 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 MMP7P09237 267 aaPredicted RBP13.86□□□□□ -0.19
TMEM53-204ENST00000372243 MYL12AP19105 171 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 PAX7P23759 505 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 C21orf33P30042 268 aaPredicted RBP13.86□□□□□ -0.19
TMEM53-204ENST00000372243 RPS27P42677 84 aaKnown RBP13.86□□□□□ -0.19
TMEM53-204ENST00000372243 HCCSP53701 268 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 MVKQ03426 396 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 SCRN3Q0VDG4 424 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 HIKESHIQ53FT3 197 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 OTPQ5XKR4 325 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 DCXRQ7Z4W1 244 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 P2RY8Q86VZ1 359 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 ZNF808Q8N4W9 903 aaPredicted RBP13.86□□□□□ -0.19
TMEM53-204ENST00000372243 STEAP2Q8NFT2 490 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 ST7LQ8TDW4 575 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 ASB17Q8WXJ9 295 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 SGCDQ92629 289 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 LRRC46Q96FV0 321 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 ZNF649Q9BS31 505 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 ERVK13-1Q9NX77 482 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 TIMM10BQ9Y5J6 103 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 RELNP78509 3460 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 HIVEP3Q5T1R4 2406 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 ZNF462Q96JM2 2506 aa13.86□□□□□ -0.19
TMEM53-204ENST00000372243 MAGEA13PA6NCF6 341 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms