RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 BTG1P62324 171 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 CD276Q5ZPR3 534 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 KDM4DQ6B0I6 523 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 MARCH3Q86UD3 253 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZBTB44Q8NCP5 570 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 GCDHQ92947 438 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 PRRX2Q99811 253 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ARHGDIGQ99819 225 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 VN1R3Q9BXE9 311 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 TRAV36DV7A0A075B6V5 113 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 SPTY2D1-AS1A0A0U1RR47 76 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 AQP7P3A6NL99 342 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 B3GALT4O96024 378 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 HOXB5P09067 269 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 GPR3P46089 330 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ERVK-16P61578 105 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 LCN6P62502 163 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 OXA1LQ15070 435 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 SIAH3Q8IW03 269 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 LSMEM1Q8N8F7 131 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF707Q96C28 371 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ELOVL3Q9HB03 270 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 TMEM212A6NML5 194 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 DSCR3O14972 297 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 F13BP05160 661 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR2T7P0C7T2 308 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 ARNTP27540 789 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 PIGAP37287 484 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 TFF2Q03403 129 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 SLC14A1Q13336 389 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 MBOAT2Q6ZWT7 520 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR2T27Q8NH04 317 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 CPT1CQ8TCG5 803 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 HINT2Q9BX68 163 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR52A5Q9H2C5 316 aa12.21□□□□□ -0.45
RAPGEF1-201ENST00000372189 A0A087X0M5 115 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 A0A1B0GX30 115 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 PLPP1O14494 284 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 SDHBP21912 280 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 S100A11P31949 105 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 PLCXD3Q63HM9 321 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 MAML2Q8IZL2 1156 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 SIRT6Q8N6T7 355 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 ACKR4Q9NPB9 350 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 EHFQ9NZC4 300 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 KDM4EB2RXH2 506 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 PRICKLE3O43900 615 aaPredicted RBP12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 LALBAP00709 142 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 CHRM4P08173 479 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 HTR1FP30939 366 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 CCL7P80098 99 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 SQSTM1Q13501 440 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 SMUG1Q53HV7 270 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 FAM71E1Q6IPT2 247 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 IL34Q6ZMJ4 242 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 TSEN54Q7Z6J9 526 aaKnown RBP12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 CHAC2Q8WUX2 184 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 RNF141Q8WVD5 230 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC35B4Q969S0 331 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 C20orf85Q9H1P6 137 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 A4GALTQ9NPC4 353 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 FBXO7Q9Y3I1 522 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 ETV7Q9Y603 341 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.46
RAPGEF1-201ENST00000372189 ST6GAL1P15907 406 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SHC1P29353 583 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 MPLP40238 635 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SLC7A6Q92536 515 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 NEURL3Q96EH8 262 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 BOLA1Q9Y3E2 137 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 A0A0B4J2A0 478 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 FAM166BA8MTA8 275 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 LY75O60449 1722 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 LPLP06858 475 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 METTL15P1P0C7V9 234 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 RAB13P51153 203 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 HYAL4Q2M3T9 481 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 DEFB109BQ30KR1 87 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SAPCD1Q5SSQ6 148 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 Q6ZSR9 355 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 CMIPQ8IY22 773 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 CPNE4Q96A23 557 aaPredicted RBP12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SHPKQ9UHJ6 478 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 TMEM235A6NFC5 223 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 IDSB3KWA1 339 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 H0YIG0 161 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 SMLR1H3BR10 107 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 FBXO24O75426 580 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 MPEG1Q2M385 716 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 NDUFAF7Q7L592 441 aa12.2□□□□□ -0.46
RAPGEF1-201ENST00000372189 LRRC61Q9BV99 259 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms