RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 OR4E1P0C645 316 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 OR2AK2Q8NG84 335 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 SLIT2O94813 1529 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 DUX1O43812 170 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 ACAA1P09110 424 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 VRK2Q86Y07 508 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 CAPNS2Q96L46 248 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 PACRGQ96M98 296 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 ALOX5APP20292 161 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 COL5A1-AS1Q5SY13 56 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 AGBL4Q5VU57 503 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 DHRS7BQ6IAN0 325 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 IL22RA1Q8N6P7 574 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 NANOGP1Q8N7R0 232 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 GPX8Q8TED1 209 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 MEGF6O75095 1541 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 TECPR2O15040 1411 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 CD1CP29017 333 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 HOXC5Q00444 222 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 FAM24BQ8N5W8 94 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 IL22RA2Q969J5 263 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 GPR87Q9BY21 358 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 CACNA1IQ9P0X4 2223 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 SLC35A1P78382 337 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 UBE3DQ7Z6J8 389 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 OR8B4Q96RC9 309 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 RIMS4Q9H426 269 aaPredicted RBP14.08□□□□□ -0.16
COL5A1-201ENST00000371817 NAT8BQ9UHF3 227 aa14.08□□□□□ -0.16
COL5A1-201ENST00000371817 TMEM129A0AVI4 362 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 FAM72CH0Y354 149 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 LRP3O75074 770 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 OR5AL1P0C617 328 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 ELAVL4P26378 380 aaKnown RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 TRA2BP62995 288 aaKnown RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 MAT1AQ00266 395 aaKnown RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 FAM72AQ5TYM5 149 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 FAM72DQ6L9T8 149 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 BTNL3Q6UXE8 466 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 FAM72BQ86X60 149 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 DTWD2Q8NBA8 298 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 OR5A2Q8NGI9 324 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 F13BP05160 661 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 SCGB1A1P11684 91 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 INPP5JQ15735 1006 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 C1QTNF12Q5T7M4 302 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 NLGN4YQ8NFZ3 816 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 ZNF566Q969W8 418 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 SLC35E1Q96K37 410 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 POU3F1Q03052 451 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 RING1Q06587 406 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 OR8D4Q8NGM9 314 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 WRAP73Q9P2S5 460 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 CLEC2LP0C7M8 214 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 CD99P14209 185 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 GPM6AP51674 278 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 EVX2Q03828 476 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 SELENBP1Q13228 472 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 DHRS13Q6UX07 377 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 GAS2L1Q99501 681 aaPredicted RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 STRADBQ9C0K7 418 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 NACAE9PAV3 2078 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 DUSP11O75319 330 aaKnown RBP14.07□□□□□ -0.16
COL5A1-201ENST00000371817 EVX1P49640 407 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 PM20D1Q6GTS8 502 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 SLC38A5Q8WUX1 472 aa14.07□□□□□ -0.16
COL5A1-201ENST00000371817 FOXB2Q5VYV0 432 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ANKRD16Q6P6B7 361 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ZC3H3Q8IXZ2 948 aaKnown RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ADGRG7Q96K78 797 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 SHARPINQ9H0F6 387 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 SLC25A6P12236 298 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 TRAF4Q9BUZ4 470 aaPredicted RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ZNF355PQ9NSJ1 428 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ATXN1LP0C7T5 689 aaKnown RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 SLC25A4P12235 298 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 DGCR2P98153 550 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ACOT4Q8N9L9 421 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 KLHDC7BQ96G42 594 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 TMEM9BQ9NQ34 198 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 EMCNQ9ULC0 261 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 A0A1B0GV72 72 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ELAVL3Q14576 367 aaKnown RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ANGPTL5Q86XS5 388 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 FAM26EQ8N5C1 309 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 MCTS1Q9ULC4 181 aaKnown RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 VASPP50552 380 aaPredicted RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 BPIFB3P59826 476 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 TTC32Q5I0X7 151 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 C19orf47Q8N9M1 422 aaKnown RBP14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ZNF738Q8NE65 137 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ISL2Q96A47 359 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 C19orf43Q9BQ61 176 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 NEURL2Q9BR09 285 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 MMP24Q9Y5R2 645 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 ZCWPW2A0A1B0GU75 182 aa14.06□□□□□ -0.16
COL5A1-201ENST00000371817 HTR5AP47898 357 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms