RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 KTI12Q96EK9 354 aaPredicted RBP15.78■□□□□ 0.12
CHUK-201ENST00000370397 RRNAD1Q96FB5 475 aaKnown RBP15.78■□□□□ 0.12
CHUK-201ENST00000370397 RNF126Q9BV68 326 aa15.78■□□□□ 0.12
CHUK-201ENST00000370397 STARD5Q9NSY2 213 aa15.78■□□□□ 0.12
CHUK-201ENST00000370397 IKZF2Q9UKS7 526 aa15.78■□□□□ 0.12
CHUK-201ENST00000370397 TMED7Q9Y3B3 224 aa15.78■□□□□ 0.12
CHUK-201ENST00000370397 COL5A1P20908 1838 aaPredicted RBP15.78■□□□□ 0.12
CHUK-201ENST00000370397 A0A1B0GW55 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 DISC1C4P0D8 188 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 SMAD9O15198 467 aaKnown RBP15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4L2P0CJ85 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4L3P0CJ86 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4L4P0CJ87 422 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4L5P0CJ88 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4L6P0CJ89 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4L7P0CJ90 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 ZNF28P17035 718 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 ROM1Q03395 351 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.77■□□□□ 0.12
CHUK-201ENST00000370397 ITPRIPL2Q3MIP1 535 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 CBLN3Q6UW01 205 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 OR51A2Q8NGJ7 313 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 RNF128Q8TEB7 428 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 TRIM43Q96BQ3 446 aaPredicted RBP15.77■□□□□ 0.12
CHUK-201ENST00000370397 CCNL2Q96S94 520 aaPredicted RBP15.77■□□□□ 0.12
CHUK-201ENST00000370397 TSNAXQ99598 290 aaKnown RBP15.77■□□□□ 0.12
CHUK-201ENST00000370397 DUX4Q9UBX2 424 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 OR10H1Q9Y4A9 318 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 C9orf170A2RU37 121 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 GJA4P35212 333 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 GPR18Q14330 331 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 PDGFRLQ15198 375 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 LRRC37A5PQ49AS3 106 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 TMEM71Q6P5X7 295 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 SYT4Q9H2B2 425 aa15.77■□□□□ 0.12
CHUK-201ENST00000370397 PMPCAQ10713 525 aa15.77■□□□□ 0.11
CHUK-201ENST00000370397 PNLIPRP3Q17RR3 467 aa15.77■□□□□ 0.11
CHUK-201ENST00000370397 NUP54Q7Z3B4 507 aa15.77■□□□□ 0.11
CHUK-201ENST00000370397 SLCO5A1Q9H2Y9 848 aa15.77■□□□□ 0.11
CHUK-201ENST00000370397 DOCK8Q8NF50 2099 aa15.77■□□□□ 0.11
CHUK-201ENST00000370397 OR2T1O43869 369 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 SPP1P10451 314 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 TAF13Q15543 124 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 NDUFAF7Q7L592 441 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 BPIFB2Q8N4F0 458 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 ZBTB8AQ96BR9 441 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 INTS14Q96SY0 518 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 ASF1BQ9NVP2 202 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 TEX13DA0A0J9YY54 714 aaPredicted RBP15.76■□□□□ 0.11
CHUK-201ENST00000370397 ELOCQ15369 112 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 NNATQ16517 81 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 SLC22A6Q4U2R8 563 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 C3orf33Q6P1S2 294 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 ZNF615Q8N8J6 731 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 HERVK_113Q902F9 699 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 ZMAT3Q9HA38 289 aaKnown RBP15.76■□□□□ 0.11
CHUK-201ENST00000370397 MBD2Q9UBB5 411 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 CACNA1CQ13936 2221 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 PHF3Q92576 2039 aaKnown RBP15.76■□□□□ 0.11
CHUK-201ENST00000370397 TRBV23OR9-2A0A075B6M9 112 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 FAM157AC9JC47 383 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 MEOX2P50222 304 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 PPP1CAP62136 330 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 MEP1BQ16820 701 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 GLYATL3Q5SZD4 288 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 UNQ6126/PRO20091Q6UXV3 157 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 TMPPEQ6ZT21 453 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 CATSPERDQ86XM0 798 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 LURAP1LQ8IV03 231 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 C16orf52Q8NHV5 167 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 TAAR8Q969N4 342 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 ELOVL3Q9HB03 270 aa15.76■□□□□ 0.11
CHUK-201ENST00000370397 ZNF629Q9UEG4 869 aaPredicted RBP15.76■□□□□ 0.11
CHUK-201ENST00000370397 H0YIZ8 118 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 RAD1O60671 282 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 HOXC4P09017 264 aaPredicted RBP15.75■□□□□ 0.11
CHUK-201ENST00000370397 LIPCP11150 499 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 HTR2CP28335 458 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 AVPR2P30518 371 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 ZNF260Q3ZCT1 412 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 TAS2R4Q9NYW5 299 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 ZNF736B4DX44 427 aaPredicted RBP15.75■□□□□ 0.11
CHUK-201ENST00000370397 H0Y8X5 98 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 PBX2P40425 430 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 QRFPP83859 136 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 PHF19Q5T6S3 580 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 WBP2NLQ6ICG8 309 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 PAPD4Q6PIY7 484 aaKnown RBP15.75■□□□□ 0.11
CHUK-201ENST00000370397 ADAD2Q8NCV1 583 aaKnown RBP15.75■□□□□ 0.11
CHUK-201ENST00000370397 RTN4RQ9BZR6 473 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 RNF122Q9H9V4 155 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 CGGBP1Q9UFW8 167 aaPredicted RBP15.75■□□□□ 0.11
CHUK-201ENST00000370397 OR2AT4A6NND4 320 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 EFSO43281 561 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 C1orf100Q5SVJ3 147 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 LIN54Q6MZP7 749 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 RTN4RL2Q86UN3 420 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 ZNF679Q8IYX0 411 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 PTX4Q96A99 478 aa15.75■□□□□ 0.11
CHUK-201ENST00000370397 CMSS1Q9BQ75 279 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms