RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TIMM50Q3ZCQ8 353 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 GXYLT1Q4G148 440 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 KLHL12Q53G59 568 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 TIGD3Q6B0B8 471 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 TMEM108Q6UXF1 575 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ADCK1Q86TW2 530 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ERI1Q8IV48 349 aaKnown RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 GTPBP8Q8N3Z3 284 aaPredicted RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 POMGNT2Q8NAT1 580 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 POC1BQ8TC44 478 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 PTP4A1Q93096 173 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SLC25A36Q96CQ1 311 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 SNX18Q96RF0 628 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 OR11A1Q9GZK7 315 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 PROK2Q9HC23 129 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 INIPQ9NRY2 104 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 ALKBH4Q9NXW9 302 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 STMN3Q9NZ72 180 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 DKKL1Q9UK85 242 aa7.79□□□□□ -1.16
TPM3-213ENST00000368545 LSM2Q9Y333 95 aaKnown RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 USP9YO00507 2555 aaPredicted RBP7.79□□□□□ -1.16
TPM3-213ENST00000368545 KALRNO60229 2985 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 FBN2P35556 2912 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 A0A1B0GUH1 482 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CCDC182A6NF36 153 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NPIPB13A6NJU9 1138 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NPIPB4C9JG80 1138 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CCRL2O00421 344 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 PLPP3O14495 311 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 SLC22A1O15245 554 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 RNF13O43567 381 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TRIM3O75382 744 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 TFPIP10646 304 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CD36P16671 472 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 DPP4P27487 766 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 SLC25A1P53007 311 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 WNT4P56705 351 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ACTC1P68032 377 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ACTA1P68133 377 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 PUDPQ08623 228 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ZP4Q12836 540 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 MLLT11Q13015 90 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 KRR1Q13601 381 aaKnown RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 GGTLC2Q14390 218 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TGIF1Q15583 401 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 GLYR1Q49A26 553 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 ARMCX4Q5H9R4 360 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 SLC16A12Q6ZSM3 486 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CYB561A3Q8NBI2 242 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NPEPL1Q8NDH3 523 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ADPRHL1Q8NDY3 354 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR51G2Q8NGK0 314 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR4K13Q8NH42 304 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 C14orf79Q96F83 325 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TEAD3Q99594 435 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 MGLLQ99685 303 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR51V1Q9H2C8 321 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CXorf56Q9H5V9 222 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 MED20Q9H944 212 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ISYNA1Q9NPH2 558 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TAS2R16Q9NYV7 291 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TAS2R5Q9NYW4 299 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 B3GALT5Q9Y2C3 310 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 HDGFL3Q9Y3E1 203 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ABCA2Q9BZC7 2435 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 A0A1W2PRG6 482 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TSPAN9O75954 239 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 RENP00797 406 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ADRA2AP08913 450 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 HSMCR30P0CW71 290 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 SRD5A2P31213 254 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 TGFBR2P37173 567 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CAPZA2P47755 286 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ETV1P50549 477 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OC90Q02509 493 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 PON3Q15166 354 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR7A5Q15622 319 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 INPP5JQ15735 1006 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 LEG1Q6P5S2 330 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 CLEC9AQ6UXN8 241 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 MDGA2Q7Z553 956 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 KLHL36Q8N4N3 616 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 ACBD7Q8N6N7 88 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR9Q1Q8NGQ5 310 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR52N1Q8NH53 320 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 RASD2Q96D21 266 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 Q96M85 177 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 JSRP1Q96MG2 331 aaPredicted RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 TSPAN32Q96QS1 320 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 OR5M11Q96RB7 305 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NMNAT3Q96T66 252 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NPAS1Q99742 590 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 PIGQQ9BRB3 760 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 UTP23Q9BRU9 249 aaKnown RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 HCAR1Q9BXC0 346 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NMNAT2Q9BZQ4 307 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 NAA50Q9GZZ1 169 aaKnown RBP7.78□□□□□ -1.16
TPM3-213ENST00000368545 TXNIPQ9H3M7 391 aa7.78□□□□□ -1.16
TPM3-213ENST00000368545 FANCFQ9NPI8 374 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms