RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 UFD1Q92890 307 aa8.81□□□□□ -1
TPM3-210ENST00000368530 OR5B2Q96R09 309 aa8.81□□□□□ -1
TPM3-210ENST00000368530 NMNAT2Q9BZQ4 307 aa8.81□□□□□ -1
TPM3-210ENST00000368530 DCSTAMPQ9H295 470 aa8.81□□□□□ -1
TPM3-210ENST00000368530 BEX4Q9NWD9 120 aaPredicted RBP8.81□□□□□ -1
TPM3-210ENST00000368530 NDUFB11Q9NX14 153 aa8.81□□□□□ -1
TPM3-210ENST00000368530 GALNT8Q9NY28 637 aa8.81□□□□□ -1
TPM3-210ENST00000368530 MRPL39Q9NYK5 338 aaKnown RBP8.81□□□□□ -1
TPM3-210ENST00000368530 ZANQ9Y493 2812 aa8.81□□□□□ -1
TPM3-210ENST00000368530 A0A1W2PRG6 482 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TVP23AA6NH52 213 aa8.8□□□□□ -1
TPM3-210ENST00000368530 LIPT2A6NK58 231 aa8.8□□□□□ -1
TPM3-210ENST00000368530 A8MXE2 369 aa8.8□□□□□ -1
TPM3-210ENST00000368530 EEF1E1-BLOC1S5C9J1V9 151 aa8.8□□□□□ -1
TPM3-210ENST00000368530 MS4A18H0YCH9 400 aa8.8□□□□□ -1
TPM3-210ENST00000368530 J3QLW9 94 aa8.8□□□□□ -1
TPM3-210ENST00000368530 MAGEB4O15481 346 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 EEF1E1O43324 174 aaKnown RBP8.8□□□□□ -1
TPM3-210ENST00000368530 GLCEO94923 617 aa8.8□□□□□ -1
TPM3-210ENST00000368530 LY6G6DO95868 133 aa8.8□□□□□ -1
TPM3-210ENST00000368530 HEXAP06865 529 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TMIGD3P0DMS9 266 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 HLA-DOBP13765 273 aa8.8□□□□□ -1
TPM3-210ENST00000368530 CPEP16870 476 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZNF19P17023 458 aa8.8□□□□□ -1
TPM3-210ENST00000368530 CENPAP49450 140 aa8.8□□□□□ -1
TPM3-210ENST00000368530 GFRA1P56159 465 aa8.8□□□□□ -1
TPM3-210ENST00000368530 RPL27P61353 136 aaKnown RBP8.8□□□□□ -1
TPM3-210ENST00000368530 POU4F2Q12837 409 aa8.8□□□□□ -1
TPM3-210ENST00000368530 GALEQ14376 348 aa8.8□□□□□ -1
TPM3-210ENST00000368530 POU4F3Q15319 338 aa8.8□□□□□ -1
TPM3-210ENST00000368530 MS4A18Q3C1V0 323 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TMEM176BQ3YBM2 270 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 TIMM50Q3ZCQ8 353 aa8.8□□□□□ -1
TPM3-210ENST00000368530 LINC01559Q495D7 138 aa8.8□□□□□ -1
TPM3-210ENST00000368530 SLC35D3Q5M8T2 416 aa8.8□□□□□ -1
TPM3-210ENST00000368530 RAET1LQ5VY80 246 aa8.8□□□□□ -1
TPM3-210ENST00000368530 SHEQ5VZ18 495 aa8.8□□□□□ -1
TPM3-210ENST00000368530 C3orf33Q6P1S2 294 aa8.8□□□□□ -1
TPM3-210ENST00000368530 CLEC9AQ6UXN8 241 aa8.8□□□□□ -1
TPM3-210ENST00000368530 H1FNTQ75WM6 255 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 ARIH2OSQ8N7S6 290 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZNF511Q8NB15 262 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZNF485Q8NCK3 441 aa8.8□□□□□ -1
TPM3-210ENST00000368530 OR52N1Q8NH53 320 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TBC1D15Q8TC07 691 aa8.8□□□□□ -1
TPM3-210ENST00000368530 DYNC2LI1Q8TCX1 351 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TRMT61AQ96FX7 289 aaKnown RBP8.8□□□□□ -1
TPM3-210ENST00000368530 FOXN4Q96NZ1 517 aa8.8□□□□□ -1
TPM3-210ENST00000368530 MDFIQ99750 246 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ALG12Q9BV10 488 aa8.8□□□□□ -1
TPM3-210ENST00000368530 RBM24Q9BX46 236 aaKnown RBP8.8□□□□□ -1
TPM3-210ENST00000368530 JAM3Q9BX67 310 aa8.8□□□□□ -1
TPM3-210ENST00000368530 POTEKPQ9BYX7 375 aa8.8□□□□□ -1
TPM3-210ENST00000368530 SYT4Q9H2B2 425 aa8.8□□□□□ -1
TPM3-210ENST00000368530 HAO2Q9NYQ3 351 aa8.8□□□□□ -1
TPM3-210ENST00000368530 CLCF1Q9UBD9 225 aa8.8□□□□□ -1
TPM3-210ENST00000368530 STUB1Q9UNE7 303 aa8.8□□□□□ -1
TPM3-210ENST00000368530 CAB39Q9Y376 341 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 CORINQ9Y5Q5 1042 aa8.8□□□□□ -1
TPM3-210ENST00000368530 A0A087WZY1 265 aa8.8□□□□□ -1
TPM3-210ENST00000368530 KIAA1324LA8MWY0 1029 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 DCTN6O00399 190 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TNFSF13O75888 250 aa8.8□□□□□ -1
TPM3-210ENST00000368530 GPANK1O95872 356 aa8.8□□□□□ -1
TPM3-210ENST00000368530 EIF1P41567 113 aaKnown RBP8.8□□□□□ -1
TPM3-210ENST00000368530 SLC25A1P53007 311 aa8.8□□□□□ -1
TPM3-210ENST00000368530 DSCR4P56555 118 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 ACTC1P68032 377 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ACTA1P68133 377 aa8.8□□□□□ -1
TPM3-210ENST00000368530 POU3F1Q03052 451 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 PUDPQ08623 228 aa8.8□□□□□ -1
TPM3-210ENST00000368530 SELENBP1Q13228 472 aa8.8□□□□□ -1
TPM3-210ENST00000368530 GGTLC2Q14390 218 aa8.8□□□□□ -1
TPM3-210ENST00000368530 MFSD13AQ14CX5 517 aa8.8□□□□□ -1
TPM3-210ENST00000368530 DGUOKQ16854 277 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TP53I3Q53FA7 332 aa8.8□□□□□ -1
TPM3-210ENST00000368530 OTPQ5XKR4 325 aa8.8□□□□□ -1
TPM3-210ENST00000368530 USP43Q70EL4 1123 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 LUZP2Q86TE4 346 aa8.8□□□□□ -1
TPM3-210ENST00000368530 OR6V1Q8N148 313 aa8.8□□□□□ -1
TPM3-210ENST00000368530 GTPBP8Q8N3Z3 284 aaPredicted RBP8.8□□□□□ -1
TPM3-210ENST00000368530 POMGNT2Q8NAT1 580 aa8.8□□□□□ -1
TPM3-210ENST00000368530 KBTBD8Q8NFY9 601 aa8.8□□□□□ -1
TPM3-210ENST00000368530 OR6S1Q8NH40 331 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZNF519Q8TB69 540 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZBTB8AQ96BR9 441 aa8.8□□□□□ -1
TPM3-210ENST00000368530 COX4I2Q96KJ9 171 aa8.8□□□□□ -1
TPM3-210ENST00000368530 C4orf36Q96KX1 117 aa8.8□□□□□ -1
TPM3-210ENST00000368530 ZFP3Q96NJ6 502 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TM9SF2Q99805 663 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TMED9Q9BVK6 235 aa8.8□□□□□ -1
TPM3-210ENST00000368530 SFXN3Q9BWM7 321 aa8.8□□□□□ -1
TPM3-210ENST00000368530 OR2B2Q9GZK3 357 aa8.8□□□□□ -1
TPM3-210ENST00000368530 TXNIPQ9H3M7 391 aa8.8□□□□□ -1
TPM3-210ENST00000368530 INPP5EQ9NRR6 644 aa8.8□□□□□ -1
TPM3-210ENST00000368530 SSR3Q9UNL2 185 aa8.8□□□□□ -1
TPM3-210ENST00000368530 COPS3Q9UNS2 423 aa8.8□□□□□ -1
TPM3-210ENST00000368530 DOCK7Q96N67 2140 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms