RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 NDUFA9Q16795 377 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 MEP1AQ16819 746 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 HES3Q5TGS1 186 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 SLX4IPQ5VYV7 408 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 LPCAT4Q643R3 524 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 CAPN13Q6MZZ7 669 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 LRRC8EQ6NSJ5 796 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 UGT3A1Q6NUS8 523 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 DNM1P34Q6PK57 102 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 RBMS3Q6XE24 437 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 ZNF621Q6ZSS3 439 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 FAM57BQ71RH2 274 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TIPARPQ7Z3E1 657 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 DHDDSQ86SQ9 333 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 PIM3Q86V86 326 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 IGFN1Q86VF2 1251 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 GPBP1Q86WP2 473 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 HPS6Q86YV9 775 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 NRMQ8IXM6 262 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 MTURNQ8N3F0 131 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 SPATA6LQ8N4H0 392 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 C2orf73Q8N5S3 287 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM251Q8N6I4 163 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 METTL13Q8N6R0 699 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 OR1L6Q8NGR2 347 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 OR9A4Q8NGU2 314 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 WDR20Q8TBZ3 569 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TMEM163Q8TC26 289 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 PPP4R1Q8TF05 950 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 ABTB1Q969K4 478 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 IGSF8Q969P0 613 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TMBIM1Q969X1 311 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 EME1Q96AY2 570 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 ANKRD9Q96BM1 317 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 MOB3AQ96BX8 217 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 JSRP1Q96MG2 331 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 IL4I1Q96RQ9 567 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 STACQ99469 402 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 RNF2Q99496 336 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 MRPS26Q9BYN8 205 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TKTL2Q9H0I9 626 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 CSTL1Q9H114 145 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 OR51M1Q9H341 326 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 ZDHHC6Q9H6R6 413 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 KIR3DX1Q9H7L2 352 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 RHOFQ9HBH0 211 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 BPIFA1Q9NP55 256 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 PRSS16Q9NQE7 514 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 SLC2A9Q9NRM0 540 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 ECHDC1Q9NTX5 307 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TREM2Q9NZC2 230 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 NDRG3Q9UGV2 375 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 KLHL21Q9UJP4 597 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 ICAM5Q9UMF0 924 aa4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 NIPBLQ6KC79 2804 aaeCLIP4.46□□□□□ -1.7
ECHDC1-204ENST00000368292 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 NPIPA5A0A0B4J1W7 369 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 KIR2DS5A0A0G2JLQ3 304 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 SH3PXD2BA1X283 911 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 HSPB2A8KAH6 182 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 NEDD8-MDP1E9PL57 170 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 H0Y980 276 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 H3BNX3 289 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 KIR2DS3K7RE56 304 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 PSMD12O00232 456 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 BTN3A3O00478 584 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 ZBTB5O15062 677 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 TGOLN2O43493 480 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 PRKYO43930 277 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 AQP8O94778 261 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 RGS11O94810 467 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 CLDN7O95471 211 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 CLDN1O95832 211 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 WDPCPO95876 746 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 GSRP00390 522 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 RBP1P09455 135 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 SMIM6P0DI80 62 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 SCGB1A1P11684 91 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 ANXA3P12429 323 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 UNGP13051 313 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 GTF2F2P13984 249 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 PTGER1P34995 402 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 GPX4P36969 197 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 YAP1P46937 504 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 LHX1P48742 406 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 IDH3GP51553 393 aaPredicted RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 ATP1B3P54709 279 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 KCNK10P57789 538 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 OR4D2P58180 307 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 NAA20P61599 178 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 KCNJ2P63252 427 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 HPCAP84074 193 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 FAM3AP98173 230 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 GUCY2DQ02846 1103 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 NME3Q13232 169 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 EXOSC2Q13868 293 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 MESDQ14696 234 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 SPA17Q15506 151 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 HSPB2Q16082 182 aa4.45□□□□□ -1.7
ECHDC1-204ENST00000368292 PHKG1Q16816 387 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms