RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	BABAM2	Q9NXR7	383 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	INTS1	Q8N201	2190 aa	Known RBP	18.63	■□□□□ 0.57
CD55-205	ENST00000367067	MAGEB4	O15481	346 aa	Predicted RBP	18.63	■□□□□ 0.57
CD55-205	ENST00000367067	LALBA	P00709	142 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	GADD45A	P24522	165 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	ACSM1	Q08AH1	577 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	TST	Q16762	297 aa	Known RBP	18.63	■□□□□ 0.57
CD55-205	ENST00000367067	TP53I3	Q53FA7	332 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	OR2A2	Q6IF42	318 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	KLB	Q86Z14	1044 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	GCNT2	Q8N0V5	402 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	C9orf106	Q8NAJ2	232 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	HTRA1	Q92743	480 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	TM9SF2	Q99805	663 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	NELFA	Q9H3P2	528 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	EMC7	Q9NPA0	242 aa		18.63	■□□□□ 0.57
CD55-205	ENST00000367067	PRR32	B1ATL7	298 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	ERVH48-1	M5A8F1	160 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	CCRL2	O00421	344 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	CAPZA2	P47755	286 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	NCS1	P62166	190 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	EIF2B1	Q14232	305 aa	Known RBP	18.62	■□□□□ 0.57
CD55-205	ENST00000367067	SGCA	Q16586	387 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	CEACAM16	Q2WEN9	425 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	ZNF684	Q5T5D7	378 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	GFRAL	Q6UXV0	394 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	PLEKHG7	Q6ZR37	379 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	FAM214B	Q7L5A3	538 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	VASH1	Q7L8A9	365 aa	Predicted RBP	18.62	■□□□□ 0.57
CD55-205	ENST00000367067	NDNF	Q8TB73	568 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	ASB17	Q8WXJ9	295 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	TTYH2	Q9BSA4	534 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	C12orf49	Q9H741	205 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	TRIM36	Q9NQ86	728 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	CYB5R1	Q9UHQ9	305 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	GNG8	Q9UK08	70 aa		18.62	■□□□□ 0.57
CD55-205	ENST00000367067	PSMD9	O00233	223 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	MSR1	P21757	451 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	MRPS34	P82930	218 aa	Known RBP	18.61	■□□□□ 0.57
CD55-205	ENST00000367067	EGR3	Q06889	387 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	LY6D	Q14210	128 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	GUSBP1	Q15486	140 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	KCTD20	Q7Z5Y7	419 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	LINC00346	Q8IVM7	164 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	NABP1	Q96AH0	204 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	AMELY	Q99218	206 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	ABHD6	Q9BV23	337 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	POLR1D	Q9Y2S0	133 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	EMC9	Q9Y3B6	208 aa		18.61	■□□□□ 0.57
CD55-205	ENST00000367067	MBD3L4	A6NDZ8	208 aa	Predicted RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	MBD3L3	A6NE82	208 aa	Predicted RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	MBD3L5	A6NJ08	208 aa	Predicted RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	TTLL8	A6PVC2	850 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	CPE	P16870	476 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	LSM6	P62312	80 aa	Known RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	BDH1	Q02338	343 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	C1orf185	Q5T7R7	199 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	RTL6	Q6ICC9	239 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	DCXR	Q7Z4W1	244 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	EGFL6	Q8IUX8	553 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	SLC24A3	Q9HC58	644 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	UPB1	Q9UBR1	384 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	IKZF2	Q9UKS7	526 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	LHFPL6	Q9Y693	200 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	ZNF587B	E7ETH6	402 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	SULT1C4	O75897	302 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	KRT8	P05787	483 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	HOXD4	P09016	255 aa	Predicted RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	NPR2	P20594	1047 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	TPBG	Q13641	420 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	SSX1	Q16384	188 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	LIPK	Q5VXJ0	399 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	KCTD18	Q6PI47	426 aa	Predicted RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	CORO6	Q6QEF8	472 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	PCSK4	Q6UW60	755 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	UBE2J2	Q8N2K1	259 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	TBC1D15	Q8TC07	691 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	ST7L	Q8TDW4	575 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	PELI1	Q96FA3	418 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	ACOXL	Q9NUZ1	547 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	TMEM38B	Q9NVV0	291 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	MRM2	Q9UI43	246 aa	Known RBP	18.6	■□□□□ 0.57
CD55-205	ENST00000367067	FAM215A	Q9Y5M1	114 aa		18.6	■□□□□ 0.57
CD55-205	ENST00000367067	USP24	Q9UPU5	2620 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	METTL15	A6NJ78	407 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	RPL36A-HNRNPH2	H7BZ11	118 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	PRRG2	O14669	202 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	TACSTD2	P09758	323 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	OR8G3P	P0DMU2	310 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	OR3A2	P47893	321 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	TIMM50	Q3ZCQ8	353 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	SEM1	Q6ZVN7	128 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	FAM220A	Q7Z4H9	259 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	ATCAY	Q86WG3	371 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	PHC2	Q8IXK0	858 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	OR2AJ1	Q8NGZ0	328 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	OR52N5	Q8NH56	324 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	UFD1	Q92890	307 aa		18.59	■□□□□ 0.57
CD55-205	ENST00000367067	CNTNAP3B	Q96NU0	1288 aa		18.59	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms