RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 C1orf174Q8IYL3 243 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FAM86B1Q8N7N1 296 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GTF3AQ92664 365 aaKnown RBP11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FAM162AQ96A26 154 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 Q96M85 177 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GORASP2Q9H8Y8 452 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SPAG4Q9NPE6 437 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 EGFL7Q9UHF1 273 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TMEM5Q9Y2B1 443 aa11.65□□□□□ -0.54
TNFRSF1A-202ENST00000366159 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 H7C1C5 153 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NGFP01138 241 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 H1F0P07305 194 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ADH4P08319 380 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 COX5BP10606 129 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MSR1P21757 451 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MPV17P39210 176 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DVL1P1P54792 670 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PCBD1P61457 104 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 LCN6P62502 163 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CCL8P80075 99 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CCNIQ14094 377 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SEC23BQ15437 767 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 MOGQ16653 247 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZNF774Q6NX45 483 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 THSD4Q6ZMP0 1018 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CYP4Z1Q86W10 505 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ALDH16A1Q8IZ83 802 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 KLF14Q8TD94 323 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 FAM46AQ96IP4 442 aaKnown RBP11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GPA33Q99795 319 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 VSX1Q9NZR4 365 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GRHPRQ9UBQ7 328 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CD300AQ9UGN4 299 aa11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TMEFF2Q9UIK5 374 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TEX13CA0A0J9YWL9 993 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TRBV4-1A0A0J9YWV2 114 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PRSS37A4D1T9 235 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 C12orf71A8MTZ7 269 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 B4DSR2 109 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 FAM157AC9JC47 383 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 H3BSA7 217 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 NDUFB2O95178 105 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TXNDC12O95881 172 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TFP02787 698 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HSD17B1P14061 328 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CTLA4P16410 223 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CCNOP22674 350 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GDI2P50395 445 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 KRTAP24-1Q3LI83 254 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZNF718Q3SXZ3 478 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 TMEM154Q6P9G4 183 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RFPL4BQ6ZWI9 263 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SLC25A40Q8TBP6 338 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SNX33Q8WV41 574 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IPCEF1Q8WWN9 437 aaPredicted RBP11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 C4orf45Q96LM5 186 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 OR2J1Q9GZK6 312 aa11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 EIF3KQ9UBQ5 218 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SAMD4AQ9UPU9 718 aaKnown RBP11.63□□□□□ -0.55
TNFRSF1A-202ENST00000366159 A0A1W2PPL8 197 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IMPA2O14732 288 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GPR37O15354 613 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IGHV1-46P01743 117 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GAAP10253 952 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 HNF1AP20823 631 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SDHAP31040 664 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RPL4P36578 427 aaKnown RBP11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GUCA1AP43080 201 aaPredicted RBP11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZNF81P51508 661 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 FAM209AQ5JX71 171 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 SPATA46Q5T0L3 261 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 UNQ6126/PRO20091Q6UXV3 157 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RRM2BQ7LG56 351 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RNF148Q8N7C7 305 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ICA1LQ8NDH6 482 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RASD2Q96D21 266 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 EMC7Q9NPA0 242 aa11.62□□□□□ -0.55
TNFRSF1A-202ENST00000366159 IGHV1-69-2A0A0G2JMI3 117 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZSCAN5BA6NJL1 495 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PPIHO43447 177 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DIRAS1O95057 198 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GCH1P30793 250 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 CDKN2AP42771 156 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PPP1CBP62140 327 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 LSM6P62312 80 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GLO1Q04760 184 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 KRR1Q13601 381 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 KCNMB1Q16558 191 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 GPR139Q6DWJ6 353 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 DPY19L2P2Q6ZN68 376 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PTCHD4Q6ZW05 846 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 VASH1Q7L8A9 365 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PIGWQ7Z7B1 504 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZER1Q7Z7L7 766 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ABHD4Q8TB40 342 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 PYURFQ96I23 114 aa11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 RSRC1Q96IZ7 334 aaKnown RBP11.61□□□□□ -0.55
TNFRSF1A-202ENST00000366159 ZNF570Q96NI8 536 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms