RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ORAI1Q96D31 301 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 SLC25A38Q96DW6 304 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 LPAR4Q99677 370 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 RTN4RQ9BZR6 473 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 PDE7BQ9NP56 450 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 DNAJB11Q9UBS4 358 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 MRM2Q9UI43 246 aaKnown RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 KLHDC2Q9Y2U9 406 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 NUP210LQ5VU65 1888 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 A0A087WV48 116 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 A0A1B0GVT2 93 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 ACOD1A6NK06 481 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 PSMD9O00233 223 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 PDCD5O14737 125 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 HOXA3O43365 443 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 CDC14BO60729 498 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 MAGEB1P43366 347 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 RPL18Q07020 188 aaKnown RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 SSPNQ14714 243 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 GRM7Q14831 915 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 GSG1Q2KHT4 349 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 STPG1Q5TH74 334 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 SLC22A10Q63ZE4 541 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 CREB3L2Q70SY1 520 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 C9orf62Q8N4C0 152 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 LSM14AQ8ND56 463 aaKnown RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF721Q8TF20 911 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 KTI12Q96EK9 354 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 LCORQ96JN0 433 aaPredicted RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 TGM7Q96PF1 710 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 OR2M2Q96R28 347 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 MED28Q9H204 178 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 MRPL39Q9NYK5 338 aaKnown RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 EPHA6Q9UF33 1036 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 TEKT2Q9UIF3 430 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 MRPS7Q9Y2R9 242 aaKnown RBP6.56□□□□□ -1.36
CLCN3-202ENST00000360642 MMACHCQ9Y4U1 282 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 WDFY4Q6ZS81 3184 aa6.56□□□□□ -1.36
CLCN3-202ENST00000360642 TMEM72A0PK05 275 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 FABP7O15540 132 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 DHHO43323 396 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 OR2B3O76000 313 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 DDAH2O95865 285 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 TACSTD2P09758 323 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 HPGDP15428 266 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 GRPRP30550 384 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 RORAP35398 523 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CCR6P51684 374 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 EFNA3P52797 238 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 MESTQ5EB52 335 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 BTN2A1Q7KYR7 527 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 OR6V1Q8N148 313 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 DEFB119Q8N690 84 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF671Q8TAW3 534 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 LMX1AQ8TE12 382 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 TAAR8Q969N4 342 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 TSPAN32Q96QS1 320 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CACNG6Q9BXT2 260 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 LAT2Q9GZY6 243 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 OR51J1Q9H342 316 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 AUNIPQ9H7T9 357 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ZFP64Q9NPA5 681 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 PNO1Q9NRX1 252 aaKnown RBP6.55□□□□□ -1.36
CLCN3-202ENST00000360642 V9GY05 133 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 TRBV5-5A0A0J9YX44 114 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF217O75362 1048 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 SPARCP09486 303 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CD27P26842 260 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 STOMP27105 288 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CD38P28907 300 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 TACR3P29371 465 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 LCN1P31025 176 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 SNTB2Q13425 540 aaKnown RBP6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ALKBH1Q13686 389 aaKnown RBP6.55□□□□□ -1.36
CLCN3-202ENST00000360642 HES5Q5TA89 166 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 LIPNQ5VXI9 398 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 STAC2Q6ZMT1 411 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 LINC00346Q8IVM7 164 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 TMEM151BQ8IW70 566 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 IZUMO1Q8IYV9 350 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 OR1F2PQ96R84 312 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CUTCQ9NTM9 273 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 SOHLH2Q9NX45 425 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ARHGEF9O43307 516 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 GMFGO60234 142 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ICOSLGO75144 302 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 OR8G3PP0DMU2 310 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CALCBP10092 127 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CXCL3P19876 107 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 PTH2RP49190 550 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 CCR4P51679 360 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 SNRPD2P62316 118 aaKnown RBP6.55□□□□□ -1.36
CLCN3-202ENST00000360642 ZNF117Q03924 483 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 DMWDQ09019 674 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 Q499Y3 187 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 RNASE12Q5GAN4 147 aaKnown RBP6.55□□□□□ -1.36
CLCN3-202ENST00000360642 EEF1A1P5Q5VTE0 462 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 PWWP2BQ6NUJ5 590 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 FCRLAQ7L513 359 aa6.55□□□□□ -1.36
CLCN3-202ENST00000360642 LRRTM1Q86UE6 522 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms