RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PIGQQ9BRB3 760 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TIMM29Q9BSF4 260 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 NAA11Q9BSU3 229 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF471Q9BX82 626 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TRIM2Q9C040 744 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM117AQ9C073 453 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 WASF3Q9UPY6 502 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A087X0M5 115 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A1B0GX30 115 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM221BA6H8Z2 402 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 M0QYG6 137 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 CCSO14618 274 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 GPRIN2O60269 458 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 EIF4E2O60573 245 aaKnown RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FARS2O95363 451 aaKnown RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 MT-ND4LP03901 98 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 RAB4AP20338 218 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 G0S2P27469 103 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 S100A2P29034 98 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 SDHAP31040 664 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 IGFALSP35858 605 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 MNDAP41218 407 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 CTXN1P60606 82 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ENPP2Q13822 863 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TAF13Q15543 124 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 NCMAPQ5T1S8 102 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 LRRC69Q6ZNQ3 347 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF546Q86UE3 836 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 SFTPA2Q8IWL1 248 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 METTL27Q8N6F8 245 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 PLPP7Q8NBV4 271 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM3CQ92520 227 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 HIST1H2BAQ96A08 127 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 MIB2Q96AX9 1013 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ELF4Q99607 663 aaPredicted RBP7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 APOOQ9BUR5 198 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM106CQ9BVX2 250 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ATG5Q9H1Y0 275 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FRRS1LQ9P0K9 344 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 FBXO4Q9UKT5 387 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 ENTPD2Q9Y5L3 495 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 KIAA1549LQ6ZVL6 1849 aa7.47□□□□□ -1.21
CDC42SE1-201ENST00000357235 A0A0D9SG52 128 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR6C76A6NM76 312 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 DCTN6O00399 190 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2T1O43869 369 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 CTNSO60931 367 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 IFNA10P01566 189 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 IGKV1D-16P01601 117 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 IL5P05113 134 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 TACSTD2P09758 323 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 RCC1P18754 421 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 ACAA2P42765 397 aaKnown RBP7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 GRK6P43250 576 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 CSNK1EP49674 416 aaKnown RBP7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 COTL1Q14019 142 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 NKPD1Q17RQ9 610 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 PRICKLE4Q2TBC4 344 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 ARHGAP40Q5TG30 622 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF227Q86WZ6 799 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR9A4Q8NGU2 314 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR4C3Q8NH37 302 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 ARL11Q969Q4 196 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 DNAJB12Q9NXW2 375 aaKnown RBP7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 VSX1Q9NZR4 365 aaPredicted RBP7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 LRIT1Q9P2V4 623 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 SDK1Q7Z5N4 2213 aa7.46□□□□□ -1.21
CDC42SE1-201ENST00000357235 PRSS38A1L453 326 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 C11orf98E9PRG8 122 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 NPIPB9F8W1W9 429 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 TSTD3H0UI37 97 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 PPIHO43447 177 aaKnown RBP7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 ACTL6AO96019 429 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 HCKP08631 526 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 CCL5P13501 91 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 RPS4Y1P22090 263 aaKnown RBP7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 RPS21P63220 83 aaKnown RBP7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 PSG6Q00889 435 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 FHL1Q13642 323 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 GAB4Q2WGN9 574 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 BEST3Q8N1M1 668 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 FRMD1Q8N878 549 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 SP7Q8TDD2 431 aaPredicted RBP7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 FGF13Q92913 245 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 PPP1R14AQ96A00 147 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 C3orf49Q96BT1 292 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 PHYHIPLQ96FC7 376 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 MARS2Q96GW9 593 aaKnown RBP7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 POM121Q96HA1 1249 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 OR2M4Q96R27 311 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 CLCC1Q96S66 551 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 MYADMQ96S97 322 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 COMMD4Q9H0A8 199 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 METTL9Q9H1A3 318 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 CHRDQ9H2X0 955 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 POFUT1Q9H488 388 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 WDR76Q9H967 626 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 CERS4Q9HA82 394 aa7.46□□□□□ -1.22
CDC42SE1-201ENST00000357235 PLEKHA1Q9HB21 404 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms