RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DPTQ07507 201 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ETV3LQ6ZN32 361 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 OSTM1Q86WC4 334 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PGBD5Q8N414 524 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.04□□□□□ -1.443e-11■■■■■ 41.3
VPS13B-202ENST00000357162 USP24Q9UPU5 2620 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF814B7Z6K7 855 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 RAB27BO00194 218 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 FZD6O60353 706 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 HMGN2P05204 90 aaKnown RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SERPINA7P05543 415 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PPP1CBP62140 327 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ATP6V1FQ16864 119 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 EDARADDQ8WWZ3 215 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 NXPE3Q969Y0 559 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MTFP1Q9UDX5 166 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PTBP3O95758 552 aaKnown RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 OR4E1P0C645 316 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 KIR2DS2P43631 304 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 LY6G5CQ5SRR4 150 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 DGAT2L6Q6ZPD8 337 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SSX8Q7RTT4 187 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MRPL21Q7Z2W9 205 aaKnown RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZBTB44Q8NCP5 570 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PIK3IP1Q96FE7 263 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MSLNLQ96KJ4 702 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 RPL10LQ96L21 214 aaKnown RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PHLPP1O60346 1717 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 NRLP54845 237 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 BTG2P78543 158 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 LMAN2Q12907 356 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 RTP2Q5QGT7 225 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ETFRF1Q6IPR1 90 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SUSD1Q6UWL2 747 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 TOMM40LQ969M1 308 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 NEIL1Q96FI4 390 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SDSLQ96GA7 329 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SMIM7Q9BQ49 75 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 HAND1O96004 215 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 GDI1P31150 447 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 WDR20Q8TBZ3 569 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 CPNE4Q96A23 557 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PLEK2Q9NYT0 353 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 BOKQ9UMX3 212 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF684Q5T5D7 378 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ARRDC2Q8TBH0 407 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ANAPC16Q96DE5 110 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MANBALQ9NQG1 85 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SPHK2Q9NRA0 654 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 FOXD2O60548 495 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 IFI6P09912 130 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 G0S2P27469 103 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SLC36A2Q495M3 483 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 CRTC1Q6UUV9 634 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MMP21Q8N119 569 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 GABRG1Q8N1C3 465 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 NUDCD2Q8WVJ2 157 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 POM121Q96HA1 1249 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 CAPNS2Q96L46 248 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SLC5A6Q9Y289 635 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MT-ND6P03923 174 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 IRF2P14316 349 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 BMPR1AP36894 532 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 PJVKQ0ZLH3 352 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SELENBP1Q13228 472 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 C17orf107Q6ZR85 190 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 TMEM229BQ8NBD8 167 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 AMBRA1Q9C0C7 1298 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 C19orf53Q9UNZ5 99 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 SLC31A1O15431 190 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 HOXC11O43248 304 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 RPL12P30050 165 aaKnown RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 YPEL5P62699 121 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 FCRLBQ6BAA4 426 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 FAM71E1Q6IPT2 247 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF705AQ6ZN79 300 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.04□□□□□ -1.44
VPS13B-202ENST00000357162 UBAC2Q8NBM4 344 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ZNF384Q8TF68 577 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 MS4A8Q9BY19 250 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 BET1LQ9NYM9 111 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 ASB1Q9Y576 335 aa6.04□□□□□ -1.44
VPS13B-202ENST00000357162 BTF3P20290 206 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 OR1D4P47884 311 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 HNRNPA3P51991 378 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 DLX2Q07687 328 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 MAP4K2Q12851 820 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 THEM4Q5T1C6 240 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SLC48A1Q6P1K1 146 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 CARFQ8N187 725 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 ESRP2Q9H6T0 727 aaKnown RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 SIRT5Q9NXA8 310 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 STRCQ7RTU9 1775 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 A0A1B0GTQ1 180 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 LNP1A1A4G5 178 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 DCDC2BA2VCK2 349 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 H3BQ06 376 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-202ENST00000357162 LEFTY2O00292 366 aa6.03□□□□□ -1.44
VPS13B-202ENST00000357162 DSCR3O14972 297 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms