RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SPACA1Q9HBV2 294 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 FGF20Q9NP95 211 aaPredicted RBP13.59□□□□□ -0.23
CHD4-201ENST00000357008 STRAPQ9Y3F4 350 aaKnown RBP13.59□□□□□ -0.23
CHD4-201ENST00000357008 A0A1W2PR48 441 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 UMAD1C9J7I0 102 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 AFMIDQ63HM1 303 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 OR11L1Q8NGX0 322 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 WFDC5Q8TCV5 224 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 ASB13Q8WXK3 278 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 GNPNAT1Q96EK6 184 aaPredicted RBP13.59□□□□□ -0.23
CHD4-201ENST00000357008 PADI1Q9ULC6 663 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 APOA2P02652 100 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 SDHAP31040 664 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 TMEM182Q6ZP80 229 aaPredicted RBP13.59□□□□□ -0.23
CHD4-201ENST00000357008 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 ZDHHC5Q9C0B5 715 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 LAMB4A4D0S4 1761 aa13.59□□□□□ -0.23
CHD4-201ENST00000357008 TXNDC12O95881 172 aa13.58□□□□□ -0.23
CHD4-201ENST00000357008 AGBL5Q8NDL9 886 aa13.58□□□□□ -0.23
CHD4-201ENST00000357008 MUCL1Q96DR8 90 aa13.58□□□□□ -0.23
CHD4-201ENST00000357008 PARP12Q9H0J9 701 aaKnown RBP13.58□□□□□ -0.23
CHD4-201ENST00000357008 UFSP2Q9NUQ7 469 aa13.58□□□□□ -0.23
CHD4-201ENST00000357008 SPHK1Q9NYA1 384 aa13.58□□□□□ -0.23
CHD4-201ENST00000357008 THAP10Q9P2Z0 257 aaPredicted RBP13.58□□□□□ -0.23
CHD4-201ENST00000357008 DHCR7Q9UBM7 475 aaKnown RBP13.58□□□□□ -0.23
CHD4-201ENST00000357008 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.23
CHD4-201ENST00000357008 MYH9P35579 1960 aaKnown RBP13.58□□□□□ -0.23
CHD4-201ENST00000357008 TLCD2A6NGC4 264 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 GPR171O14626 319 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 AKR7A2O43488 359 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 SIGLEC6O43699 453 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 S100A8P05109 93 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 SEMA6DQ8NFY4 1073 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 OR5K3A6NET4 321 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 TIMM8AO60220 97 aaPredicted RBP13.58□□□□□ -0.24
CHD4-201ENST00000357008 CXCL12P48061 93 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 TMEM71Q6P5X7 295 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 FAM58AQ8N1B3 248 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 ZBTB44Q8NCP5 570 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 SLC25A43Q8WUT9 341 aaPredicted RBP13.58□□□□□ -0.24
CHD4-201ENST00000357008 B3GAT1Q9P2W7 334 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 NME2P1O60361 137 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 ABLIM3O94929 683 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 ARRB2P32121 409 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 TLE1Q04724 770 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 PTOV1Q86YD1 416 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 OR2AK2Q8NG84 335 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 TOX2Q96NM4 488 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 PBX4Q9BYU1 374 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 HSPB2A8KAH6 182 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 H7BYZ3 331 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 HSD17B6O14756 317 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CTXN2P0C2S0 81 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 UBE2IP63279 158 aaKnown RBP13.58□□□□□ -0.24
CHD4-201ENST00000357008 CDK5R1Q15078 307 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 HSPB2Q16082 182 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 MOB1AQ9H8S9 216 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 ERVMER34-1Q9H9K5 563 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 AK3Q9UIJ7 227 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 TGOLN2O43493 480 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A6P0DMU7 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A5P0DMU8 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A7P0DMV0 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A8P0DMV1 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A9P0DMV2 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 MGMTP16455 207 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A2Q5DJT8 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A1Q5HYN5 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 CT45A3Q8NHU0 189 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 FGF21Q9NSA1 209 aa13.58□□□□□ -0.24
CHD4-201ENST00000357008 TMEM127O75204 238 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 SLC2A1P11166 492 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 APOBEC1P41238 236 aaKnown RBP13.57□□□□□ -0.24
CHD4-201ENST00000357008 P2RX1P51575 399 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 CTF1Q16619 201 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.57□□□□□ -0.24
CHD4-201ENST00000357008 PHYHD1Q5SRE7 291 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 OR5M8Q8NGP6 311 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 DHRS9Q9BPW9 319 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 C5P01031 1676 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 TMEM235A6NFC5 223 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 TPOP07202 933 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 FKBP2P26885 142 aaKnown RBP13.57□□□□□ -0.24
CHD4-201ENST00000357008 RAB1AP62820 205 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 BAP18Q8IXM2 172 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 SLC6A17Q9H1V8 727 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 FLVCR2Q9UPI3 526 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 ZNF587BE7ETH6 402 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 TMPRSS11DO60235 418 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 SBK3P0C264 359 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 TBPP20226 339 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 FCGR2CP31995 323 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 OR10A3P58181 314 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
CHD4-201ENST00000357008 DYNLRB1Q9NP97 96 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 PRAMEF25A6NGN4 478 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 TARM1B6A8C7 271 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 NXPH3O95157 252 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 OR4E1P0C645 316 aa13.57□□□□□ -0.24
CHD4-201ENST00000357008 EGR3Q06889 387 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms