RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 PDCD10Q9BUL8 212 aa13.72□□□□□ -0.21
PTBP1-203ENST00000356948 TMEM185BQ9H7F4 350 aa13.72□□□□□ -0.21
PTBP1-203ENST00000356948 SLC22A11Q9NSA0 550 aa13.72□□□□□ -0.21
PTBP1-203ENST00000356948 TAS2R4Q9NYW5 299 aa13.72□□□□□ -0.21
PTBP1-203ENST00000356948 DUX4Q9UBX2 424 aa13.72□□□□□ -0.21
PTBP1-203ENST00000356948 PRELID3BQ9Y3B1 194 aa13.72□□□□□ -0.21
PTBP1-203ENST00000356948 SDK2Q58EX2 2172 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 FITM1A5D6W6 292 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 NDUFB6O95139 128 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 ZP3P21754 424 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 MRPS21P82921 87 aaKnown RBP13.71□□□□□ -0.21
PTBP1-203ENST00000356948 FOXK1P85037 733 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 TMED4Q7Z7H5 227 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 DUSP19Q8WTR2 217 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 PMM1Q92871 262 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 ZNF471Q9BX82 626 aaPredicted RBP13.71□□□□□ -0.21
PTBP1-203ENST00000356948 ATG5Q9H1Y0 275 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 A0A1B0GUH1 482 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 ZNF705EA8MWA4 302 aaPredicted RBP13.71□□□□□ -0.21
PTBP1-203ENST00000356948 IL33O95760 270 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 CXCR1P25024 350 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 NSDHLQ15738 373 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 HACD4Q5VWC8 232 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 ZNF626Q68DY1 528 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 GALNT16Q8N428 558 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 OR10K1Q8NGX5 313 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 ARL5BQ96KC2 179 aa13.71□□□□□ -0.21
PTBP1-203ENST00000356948 TINAGL1Q9GZM7 467 aaPredicted RBP13.71□□□□□ -0.21
PTBP1-203ENST00000356948 TRBV23-1A0A0A0MS06 115 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 A0A1W2PPC4 97 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 GGT3PA6NGU5 568 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 SUSD5O60279 629 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 TACSTD2P09758 323 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 C4orf46Q504U0 113 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 PAN3Q58A45 887 aaKnown RBP13.71□□□□□ -0.22
PTBP1-203ENST00000356948 METTL11BQ5VVY1 283 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 LIN54Q6MZP7 749 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF627Q7L945 461 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 OTOSQ8NHW6 89 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 METTL21AQ8WXB1 218 aa13.71□□□□□ -0.22
PTBP1-203ENST00000356948 COA3Q9Y2R0 106 aaPredicted RBP13.71□□□□□ -0.22
PTBP1-203ENST00000356948 ACOT7O00154 380 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF749O43361 778 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 SRPX2O60687 465 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 BGLAPP02818 100 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 HIST1H2ABP04908 130 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 HSD17B7P56937 341 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 GMFBP60983 142 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ADAM8P78325 824 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 GLYATL3Q5SZD4 288 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 FAM69AQ5T7M9 428 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 HIST3H2AQ7L7L0 130 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 OR1J4Q8NGS1 313 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 HIST1H2ACQ93077 130 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 MCHR2Q969V1 340 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 FAM46BQ96A09 425 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 EMC6Q9BV81 110 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 STEAP1Q9UHE8 339 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 TRBV5-7A0A0A0MS05 114 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 FAM221BA6H8Z2 402 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CREBL2O60519 120 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 RBBP9O75884 186 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 FOLR1P15328 257 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 SLC25A1P53007 311 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 INPP5JQ15735 1006 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 SLC36A1Q7Z2H8 476 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 GPR148Q8TDV2 347 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 FAM3DQ96BQ1 224 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 LCORQ96JN0 433 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CMSS1Q9BQ75 279 aaKnown RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 NUDT22Q9BRQ3 303 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 TREM1Q9NP99 234 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CUTCQ9NTM9 273 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 MED29Q9NX70 200 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CTSFQ9UBX1 484 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 FARSAQ9Y285 508 aaKnown RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 OR5K4A6NMS3 321 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 MCRIP1C9JLW8 97 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CCSO14618 274 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF254O75437 659 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 PNMTP11086 282 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF417Q8TAU3 575 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF578Q96N58 590 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF285Q96NJ3 590 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 SPACA5Q96QH8 159 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ZNF587Q96SQ5 575 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CDCA3Q99618 268 aaPredicted RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 C7orf50Q9BRJ6 194 aaKnown RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 ACTR6Q9GZN1 396 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 SLITRK2Q9H156 845 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 CDV3Q9UKY7 258 aaKnown RBP13.7□□□□□ -0.22
PTBP1-203ENST00000356948 EMC9Q9Y3B6 208 aa13.7□□□□□ -0.22
PTBP1-203ENST00000356948 TNRC18O15417 2968 aaPredicted RBP13.69□□□□□ -0.22
PTBP1-203ENST00000356948 WIPF3A6NGB9 483 aa13.69□□□□□ -0.22
PTBP1-203ENST00000356948 FARS2O95363 451 aaKnown RBP13.69□□□□□ -0.22
PTBP1-203ENST00000356948 IGKV3-11P04433 115 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms