RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PROCRQ9UNN8 238 aa12.4□□□□□ -0.43
SMC6-201ENST00000351948 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 M0R233 179 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 TBX19O60806 448 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 IGHA2P01877 340 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 AKAIN1P0CW23 69 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 GP2P55259 537 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 EDDM3AQ14507 147 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 C3AR1Q16581 482 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 GLIPR1L1Q6UWM5 242 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 MOV10Q9HCE1 1003 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 TMEFF2Q9UIK5 374 aaPredicted RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 TRAV17A0A0B4J275 112 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 SLC22A5O76082 557 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 FKBP2P26885 142 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 EDDM3BP56851 147 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 PLGLAQ15195 96 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 YIF1BQ5BJH7 314 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 STPG1Q5TH74 334 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 OR2T35Q8NGX2 323 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 ZBTB8AQ96BR9 441 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 TXNDC15Q96J42 360 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 RNF170Q96K19 258 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 TRAPPC2LQ9UL33 140 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 FITM1A5D6W6 292 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 FABP6P51161 128 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 OR8B8Q15620 311 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 FAM27D1Q5T7N8 215 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 PRSS45Q7RTY3 260 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 FAM83FQ8NEG4 500 aaPredicted RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 FAM3DQ96BQ1 224 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 SYT3Q9BQG1 590 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 SLCO1B1Q9Y6L6 691 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 A0A0B4J203 849 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 MASP2O00187 686 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 SERPINA7P05543 415 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 SERPINE2P07093 398 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 CSF1P09603 554 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 PRKACBP22694 351 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 EMP3P54852 163 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 GRB2P62993 217 aaKnown RBP12.39□□□□□ -0.43
SMC6-201ENST00000351948 DEFB108BQ8NET1 73 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 STEAP2Q8NFT2 490 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 TMEM165Q9HC07 324 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 C12orf4Q9NQ89 552 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 GPR84Q9NQS5 396 aa12.39□□□□□ -0.43
SMC6-201ENST00000351948 A0A1B0GVG6 124 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 M0R1B8 84 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 TOX3O15405 576 aaPredicted RBP12.38□□□□□ -0.43
SMC6-201ENST00000351948 DHHO43323 396 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 MDGA2Q7Z553 956 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 CMTM1Q8IZ96 169 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 BPIFB2Q8N4F0 458 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 OR6F1Q8NGZ6 308 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 MOGAT1Q96PD6 335 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 KCNN3Q9UGI6 736 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 HDGFL3Q9Y3E1 203 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 TNFSF12O43508 249 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 GPX5O75715 221 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 CD53P19397 219 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SLC22A25Q6T423 547 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 DGAT2L6Q6ZPD8 337 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
SMC6-201ENST00000351948 SLCO1C1Q9NYB5 712 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 FBXO4Q9UKT5 387 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 B9D1Q9UPM9 204 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 TIMM10BQ9Y5J6 103 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SDK2Q58EX2 2172 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SERTM1A2A2V5 107 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SP9P0CG40 484 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMC6-201ENST00000351948 PLEKHN1Q494U1 663 aaPredicted RBP12.38□□□□□ -0.43
SMC6-201ENST00000351948 BORAQ6PGQ7 559 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 GSG1LQ6UXU4 331 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SLC22A24Q8N4F4 322 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SIGLEC7Q9Y286 467 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 ALG5Q9Y673 324 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 CKAP5Q14008 2032 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 ALG1L2C9J202 215 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 CELA2AP08217 269 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 IL7P13232 177 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 CAV2P51636 162 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 GAB4Q2WGN9 574 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 CLDN22Q8N7P3 220 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 OR4K15Q8NH41 348 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 VSTM2LQ96N03 204 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 SIGLEC11Q96RL6 698 aa12.38□□□□□ -0.43
SMC6-201ENST00000351948 TMEM129A0AVI4 362 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 ZNF891A8MT65 544 aaPredicted RBP12.37□□□□□ -0.43
SMC6-201ENST00000351948 CDC42EP2O14613 210 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 SLC34A2O95436 690 aa12.37□□□□□ -0.43
SMC6-201ENST00000351948 PTTG1O95997 202 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms