RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ETV2O00321 342 aaPredicted RBP19.83■□□□□ 0.76
UPF3A-201ENST00000351487 ISG15P05161 165 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 TMPRSS9Q7Z410 1059 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 PLPP7Q8NBV4 271 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 SHDQ96IW2 340 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 TAS2R4Q9NYW5 299 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 NPIPA1Q9UND3 350 aa19.83■□□□□ 0.76
UPF3A-201ENST00000351487 TRAV18A0A075B6X5 111 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 LINC00862A6NCI5 91 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 PYCARD-AS1I3L0S3 204 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 ACY1Q03154 408 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 OR7A5Q15622 319 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 NKAIN1Q4KMZ8 207 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 SLC38A9Q8NBW4 561 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 RELTQ969Z4 430 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 MESP1Q9BRJ9 268 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 KCNK15Q9H427 330 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 CHST11Q9NPF2 352 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 CA10Q9NS85 328 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 HHLA2Q9UM44 414 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 AQP8O94778 261 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 OR2A4O95047 310 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 HEXBP07686 556 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 ZNF823P16415 610 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 ACHEP22303 614 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 PRSS3P35030 304 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 FMODQ06828 376 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 CSRP2Q16527 193 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 DEGS2Q6QHC5 323 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 ZNF574Q6ZN55 896 aaPredicted RBP19.82■□□□□ 0.76
UPF3A-201ENST00000351487 SLC36A1Q7Z2H8 476 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 BPHLQ86WA6 291 aaPredicted RBP19.82■□□□□ 0.76
UPF3A-201ENST00000351487 OR6N1Q8NGY5 312 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 OR2A7Q96R45 310 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 CLEC4MQ9H2X3 399 aaPredicted RBP19.82■□□□□ 0.76
UPF3A-201ENST00000351487 FANCFQ9NPI8 374 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 G6PC2Q9NQR9 355 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 WNT16Q9UBV4 365 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 AUP1Q9Y679 476 aa19.82■□□□□ 0.76
UPF3A-201ENST00000351487 C2orf72A6NCS6 295 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 LEUTXA8MZ59 168 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 ALOX12BO75342 701 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 TOXO94900 526 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 MPC2O95563 127 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 AKAIN1P0CW23 69 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 NAGAP17050 411 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 HTR2CP28335 458 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 RAP2BP61225 183 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 GUCA2AQ02747 115 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 SNTA1Q13424 505 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 ESCO2Q56NI9 601 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 FTMTQ8N4E7 242 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 UXS1Q8NBZ7 420 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 OR6M1Q8NGM8 313 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 GPX8Q8TED1 209 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 DDIT4LQ96D03 193 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 SLC25A44Q96H78 314 aaPredicted RBP19.81■□□□□ 0.76
UPF3A-201ENST00000351487 EMC9Q9Y3B6 208 aa19.81■□□□□ 0.76
UPF3A-201ENST00000351487 OR2M5A3KFT3 312 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 MEGF11A6BM72 1044 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 TMEM200CA6NKL6 621 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 TNFRSF10AO00220 468 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 HRGP04196 525 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 SSTR2P30874 369 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 ARRB1P49407 418 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-201ENST00000351487 HSF1Q00613 529 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 RIPPLY1Q0D2K3 151 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 FOXF1Q12946 379 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 ARSKQ6UWY0 536 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 DCXRQ7Z4W1 244 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 WDFY1Q8IWB7 410 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 CLEC1AQ8NC01 280 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 ANGPTL6Q8NI99 470 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 THAP3Q8WTV1 239 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-201ENST00000351487 GINS4Q9BRT9 223 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 MED11Q9P086 117 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 USP34Q70CQ2 3546 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 CACNA1EQ15878 2313 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 SULT1C2O00338 296 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 IFNA7P01567 189 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 VSIG10L2P0DP72 767 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 GABRA1P14867 456 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 PNLIPP16233 465 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 P2RX3P56373 397 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 POU3F1Q03052 451 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-201ENST00000351487 TLE3Q04726 772 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 SQSTM1Q13501 440 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 ZNF704Q6ZNC4 412 aaPredicted RBP19.8■□□□□ 0.76
UPF3A-201ENST00000351487 OR4D10Q8NGI6 311 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 ATG5Q9H1Y0 275 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 OR52A1Q9UKL2 312 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 LAMA1P25391 3075 aa19.8■□□□□ 0.76
UPF3A-201ENST00000351487 SDK1Q7Z5N4 2213 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 LOC107986453A0A1B0GWG9 222 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 TIAF1O95411 115 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 GTF2F2P13984 249 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 FOSL2P15408 326 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 ACTBP60709 375 aa19.79■□□□□ 0.76
UPF3A-201ENST00000351487 PSMA6P60900 246 aaKnown RBP19.79■□□□□ 0.76
UPF3A-201ENST00000351487 TSPAN5P62079 268 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms