RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 POM121L2Q96KW2 1035 aa19.05■□□□□ 0.64
SNX3-202ENST00000349379 FOXN4Q96NZ1 517 aa19.05■□□□□ 0.64
SNX3-202ENST00000349379 B9D1Q9UPM9 204 aa19.05■□□□□ 0.64
SNX3-202ENST00000349379 TIMM10BQ9Y5J6 103 aa19.05■□□□□ 0.64
SNX3-202ENST00000349379 CR1P17927 2039 aa19.05■□□□□ 0.64
SNX3-202ENST00000349379 OR6C68A6NDL8 312 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 C12orf71A8MTZ7 269 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 GNGT2O14610 69 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 RENP00797 406 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 BMP4P12644 408 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 CCL2P13500 99 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 LSM6P62312 80 aaKnown RBP19.04■□□□□ 0.64
SNX3-202ENST00000349379 SNRPD2P62316 118 aaKnown RBP19.04■□□□□ 0.64
SNX3-202ENST00000349379 GALK2Q01415 458 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.04■□□□□ 0.64
SNX3-202ENST00000349379 SDR9C7Q8NEX9 313 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 OR52E2Q8NGJ4 325 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 OR4Q3Q8NH05 313 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 AKR7LQ8NHP1 331 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 UTP4Q969X6 686 aaKnown RBP19.04■□□□□ 0.64
SNX3-202ENST00000349379 MRPL24Q96A35 216 aaKnown RBP19.04■□□□□ 0.64
SNX3-202ENST00000349379 DOK1Q99704 481 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 NTN4Q9HB63 628 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 CDH20Q9HBT6 801 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 BARX1Q9HBU1 254 aaPredicted RBP19.04■□□□□ 0.64
SNX3-202ENST00000349379 TBC1D23Q9NUY8 699 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 PDP1Q9P0J1 537 aaPredicted RBP19.04■□□□□ 0.64
SNX3-202ENST00000349379 REV1Q9UBZ9 1251 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 FKBP7Q9Y680 259 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 PMF1-BGLAPU3KQ54 211 aa19.04■□□□□ 0.64
SNX3-202ENST00000349379 VSTM5A8MXK1 200 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 SOX14O95416 240 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 FOSL1P15407 271 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 STOMP27105 288 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 PCSK6P29122 969 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 APLNRP35414 380 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 RPS23P62266 143 aaKnown RBP19.03■□□□□ 0.64
SNX3-202ENST00000349379 CCNIQ14094 377 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 SLC35F1Q5T1Q4 408 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 C1orf146Q5VVC0 180 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 HS3ST5Q8IZT8 346 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 C11orf40Q8WZ69 217 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 TSSK6Q9BXA6 273 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 RERGLQ9H628 205 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 ARMC1Q9NVT9 282 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 BAIAP2Q9UQB8 552 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 CMAHPQ9Y471 501 aa19.03■□□□□ 0.64
SNX3-202ENST00000349379 LOC100509620A0A075B734 347 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 ICMTO60725 284 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 DEAF1O75398 565 aaPredicted RBP19.02■□□□□ 0.64
SNX3-202ENST00000349379 TIPRLO75663 272 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 MPZL1O95297 269 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 COX5BP10606 129 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 EVX1P49640 407 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 PPOXP50336 477 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 SCRN3Q0VDG4 424 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 AQP6Q13520 282 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 ZNF774Q6NX45 483 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 CCDC121Q6ZUS5 278 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 ALDH16A1Q8IZ83 802 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 NRBF2Q96F24 287 aa19.02■□□□□ 0.64
SNX3-202ENST00000349379 MRPL37Q9BZE1 423 aaKnown RBP19.02■□□□□ 0.64
SNX3-202ENST00000349379 RPRD1BQ9NQG5 326 aaKnown RBP19.02■□□□□ 0.64
SNX3-202ENST00000349379 FBXO9Q9UK97 447 aaPredicted RBP19.02■□□□□ 0.64
SNX3-202ENST00000349379 YLPM1P49750 1951 aaKnown RBP19.01■□□□□ 0.63
SNX3-202ENST00000349379 E2F6O75461 281 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 GPANK1O95872 356 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 DBPQ10586 325 aaPredicted RBP19.01■□□□□ 0.63
SNX3-202ENST00000349379 RAB35Q15286 201 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 CLEC12BQ2HXU8 276 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 SLC36A3Q495N2 470 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 OTPQ5XKR4 325 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 SHQ1Q6PI26 577 aaKnown RBP19.01■□□□□ 0.63
SNX3-202ENST00000349379 SLC26A10Q8NG04 563 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 OR2T33Q8NG76 320 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 FN3KQ9H479 309 aa19.01■□□□□ 0.63
SNX3-202ENST00000349379 SRA1Q9HD15 236 aaKnown RBP19.01■□□□□ 0.63
SNX3-202ENST00000349379 TRIM64A6NGJ6 449 aa19■□□□□ 0.63
SNX3-202ENST00000349379 TRIM64BA6NI03 449 aa19■□□□□ 0.63
SNX3-202ENST00000349379 FAM157BP0CG42 384 aa19■□□□□ 0.63
SNX3-202ENST00000349379 WNT5AP41221 380 aa19■□□□□ 0.63
SNX3-202ENST00000349379 GDI2P50395 445 aaKnown RBP19■□□□□ 0.63
SNX3-202ENST00000349379 UCP2P55851 309 aa19■□□□□ 0.63
SNX3-202ENST00000349379 HIST1H3AP68431 136 aa19■□□□□ 0.63
SNX3-202ENST00000349379 GLO1Q04760 184 aa19■□□□□ 0.63
SNX3-202ENST00000349379 HIST2H3PS2Q5TEC6 136 aa19■□□□□ 0.63
SNX3-202ENST00000349379 HIST2H3AQ71DI3 136 aa19■□□□□ 0.63
SNX3-202ENST00000349379 SVOPLQ8N434 492 aa19■□□□□ 0.63
SNX3-202ENST00000349379 SLC37A3Q8NCC5 494 aa19■□□□□ 0.63
SNX3-202ENST00000349379 COX4I2Q96KJ9 171 aa19■□□□□ 0.63
SNX3-202ENST00000349379 SORCS2Q96PQ0 1159 aa19■□□□□ 0.63
SNX3-202ENST00000349379 BDH2Q9BUT1 245 aa19■□□□□ 0.63
SNX3-202ENST00000349379 BCL2L14Q9BZR8 327 aa19■□□□□ 0.63
SNX3-202ENST00000349379 ASH2LQ9UBL3 628 aa19■□□□□ 0.63
SNX3-202ENST00000349379 TFP02787 698 aa18.99■□□□□ 0.63
SNX3-202ENST00000349379 ANXA8P13928 327 aa18.99■□□□□ 0.63
SNX3-202ENST00000349379 EFNA4P52798 201 aa18.99■□□□□ 0.63
SNX3-202ENST00000349379 ATP6AP1Q15904 470 aa18.99■□□□□ 0.63
SNX3-202ENST00000349379 VASH1Q7L8A9 365 aaPredicted RBP18.99■□□□□ 0.63
SNX3-202ENST00000349379 ZNF101Q8IZC7 436 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms