RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MAP3K8P41279 467 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 SLC7A9P82251 487 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 HGFACQ04756 655 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 DEFB134Q4QY38 66 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 LINC01590Q5TEZ4 76 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 DMRTC2Q8IXT2 367 aaPredicted RBP13.87□□□□□ -0.19
LMNA-201ENST00000347559 FRMD1Q8N878 549 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 DNAJA3Q96EY1 480 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 INSM2Q96T92 566 aaPredicted RBP13.87□□□□□ -0.19
LMNA-201ENST00000347559 CACFD1Q9UGQ2 172 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 DCTN6O00399 190 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 P2RX6O15547 441 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 MBTPS2O43462 519 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 STK17BO94768 372 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 CHST4Q8NCG5 386 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 IRF7Q92985 503 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 SLAMF9Q96A28 289 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 ELF4Q99607 663 aaPredicted RBP13.87□□□□□ -0.19
LMNA-201ENST00000347559 TREM2Q9NZC2 230 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 KCNG2Q9UJ96 466 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 SLC22A13Q9Y226 551 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 KCNK6Q9Y257 313 aa13.87□□□□□ -0.19
LMNA-201ENST00000347559 SLC17A2O00624 439 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 VEGFDO43915 354 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 RAB6AP20340 208 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 PPICP45877 212 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 SQSTM1Q13501 440 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 TMEM244Q5VVB8 128 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 KIRREL2Q6UWL6 708 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 JAGN1Q8N5M9 183 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 ZNF615Q8N8J6 731 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 AKR7LQ8NHP1 331 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 RAB3CQ96E17 227 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 PIGQQ9BRB3 760 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 YBX2Q9Y2T7 364 aaKnown RBP13.86□□□□□ -0.19
LMNA-201ENST00000347559 TRBV5-7A0A0A0MS05 114 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 C2orf74A8MZ97 194 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 P2RY4P51582 365 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 MLF2Q15773 248 aaPredicted RBP13.86□□□□□ -0.19
LMNA-201ENST00000347559 PYY3Q5JQD4 70 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 SLC35D3Q5M8T2 416 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 METRNLQ641Q3 311 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 TTLL10Q6ZVT0 673 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 SLC16A9Q7RTY1 509 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 PRSS35Q8N3Z0 413 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 ZNF563Q8TA94 476 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 CMBLQ96DG6 245 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 OCSTAMPQ9BR26 566 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 WDR76Q9H967 626 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 OR5AC2Q9NZP5 309 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 EIF1AYO14602 144 aaKnown RBP13.86□□□□□ -0.19
LMNA-201ENST00000347559 ADAP1O75689 374 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 F13BP05160 661 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 OR8U9P0C7N5 309 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 EIF1AXP47813 144 aaKnown RBP13.86□□□□□ -0.19
LMNA-201ENST00000347559 RAB28P51157 221 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 NAAAQ02083 359 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 PMPCAQ10713 525 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 RPL7L1Q6DKI1 246 aaKnown RBP13.86□□□□□ -0.19
LMNA-201ENST00000347559 DPY19L2P2Q6ZN68 376 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 STX12Q86Y82 276 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 OR8U1Q8NH10 309 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 SUSD6Q92537 303 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 ZDHHC12Q96GR4 267 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 WIF1Q9Y5W5 379 aa13.86□□□□□ -0.19
LMNA-201ENST00000347559 HTTP42858 3142 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 A0A1W2PPE2 198 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 HTR5AP47898 357 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 GSK3AP49840 483 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 STARD6P59095 220 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 SLC9A3R2Q15599 337 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 ALG11Q2TAA5 492 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 DRAM2Q6UX65 266 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 ARRDC3Q96B67 414 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 SLC41A2Q96JW4 573 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 PRRT1Q99946 306 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TGIF2Q9GZN2 237 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TMEM74BQ9NUR3 256 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 WNT6Q9Y6F9 365 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TICRRQ7Z2Z1 1910 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TBC1D3DA0A087WVF3 549 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TBC1D3IA0A087WXS9 549 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 URADA6NGE7 173 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TBC1D3LB9A6J9 549 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 MFNGO00587 321 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TGM5O43548 720 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TBC1D3HP0C7X1 549 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
LMNA-201ENST00000347559 RPS4Y1P22090 263 aaKnown RBP13.85□□□□□ -0.19
LMNA-201ENST00000347559 S100A10P60903 97 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 SSBP1Q04837 148 aaKnown RBP13.85□□□□□ -0.19
LMNA-201ENST00000347559 WDR38Q5JTN6 314 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TBC1D3CQ6IPX1 549 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 SLC35D2Q76EJ3 337 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 TBC1D3Q8IZP1 549 aaPredicted RBP13.85□□□□□ -0.19
LMNA-201ENST00000347559 FAM174AQ8TBP5 190 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
LMNA-201ENST00000347559 MYOZ1Q9NP98 299 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms