RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CCL2P13500 99 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 GSTM3P21266 225 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 GCH1P30793 250 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 GSSP48637 474 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 KLF3P57682 345 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 PSG4Q00888 419 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 MS4A2Q01362 244 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 AQP6Q13520 282 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 FLOT2Q14254 428 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 NKPD1Q17RQ9 610 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 PGBD2Q6P3X8 592 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 OR10H5Q8NGA6 315 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 SYNPRQ8TBG9 265 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 SAMD8Q96LT4 415 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 SMR3AQ99954 134 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 SYT3Q9BQG1 590 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 ZNF416Q9BWM5 594 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 MRPL37Q9BZE1 423 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 OR2H1Q9GZK4 316 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 OR51B6Q9H340 312 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 SLCO1C1Q9NYB5 712 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 REV1Q9UBZ9 1251 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 MTORP42345 2549 aa13.59□□□□□ -0.23
TSPAN4-201ENST00000346501 LOC390937A0A1W2PQ73 354 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 DHRS12A0PJE2 317 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 DNAJC8O75937 253 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 CST1P01037 141 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 ADRA2AP08913 450 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF26P17031 533 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 LSM6P62312 80 aaKnown RBP13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 GLO1Q04760 184 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF718Q3SXZ3 478 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 SLC36A3Q495N2 470 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 LEG1Q6P5S2 330 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF620Q6ZNG0 422 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 DNM1P46Q6ZS02 220 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 Q71RC1 249 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 SPATA24Q86W54 205 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 OR1J1Q8NGS3 322 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 AKR7LQ8NHP1 331 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 CLPTM1LQ96KA5 538 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 SNX18Q96RF0 628 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 GPA33Q99795 319 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 NUAK2Q9H093 628 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 PLEK2Q9NYT0 353 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 COA3Q9Y2R0 106 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 CDH10Q9Y6N8 788 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 U3KQV3 271 aa13.58□□□□□ -0.24
TSPAN4-201ENST00000346501 IGHV4-30-2A0A087WSY4 118 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 SGCEO43556 437 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 DOK2O60496 412 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 HLA-DQA2P01906 255 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 COX5BP10606 129 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 CTLA4P16410 223 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 HTR5AP47898 357 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 MICAQ29983 383 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 TMEM154Q6P9G4 183 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 RASSF6Q6ZTQ3 369 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 AQP11Q8NBQ7 271 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 CPEB3Q8NE35 698 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 OR9Q2Q8NGE9 314 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 OR4K13Q8NH42 304 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 C10orf105Q8TEF2 133 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 POM121L2Q96KW2 1035 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 COG8Q96MW5 612 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 CHID1Q9BWS9 393 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 CDADC1Q9BWV3 514 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 SRA1Q9HD15 236 aaKnown RBP13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 EMC7Q9NPA0 242 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 TBC1D23Q9NUY8 699 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 FZR1Q9UM11 496 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 BAIAP2Q9UQB8 552 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 AKAP9Q99996 3911 aa13.57□□□□□ -0.24
TSPAN4-201ENST00000346501 ARFGEF3Q5TH69 2177 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 C2CD3Q4AC94 2353 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 TMEM129A0AVI4 362 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 ACOT8O14734 319 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 E2F6O75461 281 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 ABHD16AO95870 558 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 DAOP14920 347 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 USF1P22415 310 aaPredicted RBP13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 TUBG1P23258 451 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 CDKN2AP42771 156 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 FXYD6P3P58550 94 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 ENDOGQ14249 297 aaKnown RBP13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 CLEC12AQ5QGZ9 265 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF774Q6NX45 483 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 PTCHD4Q6ZW05 846 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 OR52E2Q8NGJ4 325 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 OR2AJ1Q8NGZ0 328 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 UBASH3BQ8TF42 649 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 GIPC3Q8TF64 312 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 NMNAT3Q96T66 252 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 WNT5BQ9H1J7 359 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 TPK1Q9H3S4 243 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 ZNF556Q9HAH1 456 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 TUBG2Q9NRH3 451 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 TAAR3PQ9P1P4 343 aa13.56□□□□□ -0.24
TSPAN4-201ENST00000346501 PLSCR5A0PG75 271 aa13.55□□□□□ -0.24
TSPAN4-201ENST00000346501 LY6HO94772 140 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms