RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CA5BP1Q8WTZ4 195 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 TMEM255BQ8WV15 326 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 BSCL2Q96G97 398 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 OPN3Q9H1Y3 402 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 NCOR1P1Q9H4R4 102 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 SYNPO2LQ9H987 977 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 TXNRD2Q9NNW7 524 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 KCNJ16Q9NPI9 418 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 ZDHHC8Q9ULC8 765 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 STARD10Q9Y365 291 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 GOLT1BQ9Y3E0 138 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 HDGFL3Q9Y3E1 203 aa7.38□□□□□ -1.23
ATG4A-201ENST00000343524 PCYT1BQ9Y5K3 369 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 NUP210Q8TEM1 1887 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-201ENST00000343524 DCHS1Q96JQ0 3298 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PIKFYVEQ9Y2I7 2098 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 KMT2EQ8IZD2 1858 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 A0A0A6YYC8 382 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PRAMEF27A3QJZ7 478 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 HSPB2A8KAH6 182 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF724A8MTY0 619 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 I3L1I5 382 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 M0R143 59 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CDC42EP2O14613 210 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CCSO14618 274 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PIN1P1O15428 100 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CNMDO75829 334 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 GLCEO94923 617 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SLC16A8O95907 504 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TBX18O95935 607 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PMP2P02689 132 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR8G3PP0DMU2 310 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PTHLHP12272 177 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 NR2C1P13056 603 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 GABRR1P24046 479 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TEAD1P28347 426 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 AKR1C3P42330 323 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF84P51523 738 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 RPS24P62847 133 aaKnown RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 DLK1P80370 383 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TGM3Q08188 693 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SLC10A1Q14973 349 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 UBE2V2Q15819 145 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 HSPB2Q16082 182 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF674Q2M3X9 581 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 DUSP28Q4G0W2 176 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 KHDRBS2Q5VWX1 349 aaKnown RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF385CQ66K41 422 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR2A2Q6IF42 318 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 Q6ZRG5 221 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 VRK2Q86Y07 508 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TRAPPC5Q8IUR0 188 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ZNF283Q8N7M2 679 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 DCAF4L2Q8NA75 395 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR8S1Q8NH09 359 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 RNASEH2CQ8TDP1 164 aaKnown RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SECTM1Q8WVN6 248 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TM4SF18Q96CE8 201 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SEC22AQ96IW7 307 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PACRGQ96M98 296 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 YPEL4Q96NS1 127 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 MYADMQ96S97 322 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 DDA1Q9BW61 102 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SGPP1Q9BX95 441 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 HCAR1Q9BXC0 346 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SRMSQ9H3Y6 488 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 FKRPQ9H9S5 495 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SPACA1Q9HBV2 294 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 IL23AQ9NPF7 189 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 LAMP5Q9UJQ1 280 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SLC7A7Q9UM01 511 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SH2B3Q9UQQ2 575 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 MEMO1Q9Y316 297 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ZFHX4Q86UP3 3567 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TRAV18A0A075B6X5 111 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 LOC100289279A0A1B0GTE1 492 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 A0A1B0GW64 132 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 SLC5A10A0PJK1 596 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CPED1A4D0V7 1026 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 DCTN6O00399 190 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TOX3O15405 576 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 B4GALT2O60909 372 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 JTBO76095 146 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CD160O95971 181 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TBPP20226 339 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CXCR1P25024 350 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR1G1P47890 313 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 ARRB1P49407 418 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 RPS15P62841 145 aaKnown RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 TAF10Q12962 218 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 CLINT1Q14677 625 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 JOSD1Q15040 202 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 GUK1Q16774 197 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 HAGHQ16775 308 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 KHDC3LQ587J8 217 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 PHF19Q5T6S3 580 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OPN5Q6U736 354 aa7.37□□□□□ -1.23
ATG4A-201ENST00000343524 GRASPQ7Z6J2 395 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-201ENST00000343524 OR2L13Q8N349 312 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms