RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 POLR1DQ9Y2S0 133 aa14.36□□□□□ -0.11
SNED1-202ENST00000342631 A0A1W2PQL4 384 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 TMEM129A0AVI4 362 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 A8MXE2 369 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 SCG5P05408 212 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 SPARCP09486 303 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 IGHV1-2P23083 117 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 CDH15P55291 814 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 ACTA2P62736 377 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 ACTG2P63267 376 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 TBCEQ15813 527 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 SOWAHCQ53LP3 525 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 SPARTQ8N0X7 666 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 OR1K1Q8NGR3 316 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 ZNF416Q9BWM5 594 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 HDHD5Q9BXW7 423 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 MRPS26Q9BYN8 205 aaKnown RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 OPN3Q9H1Y3 402 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 VCX3AQ9NNX9 186 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 COQ3Q9NZJ6 369 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 JKAMPQ9P055 326 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 LIMS3P0CW19 117 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 LIMS4P0CW20 117 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 B4GALT1P15291 398 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 CHRNB4P30926 498 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 EGR3Q06889 387 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 PIGFQ07326 219 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 ENDOGQ14249 297 aaKnown RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 ESPL1Q14674 2120 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 KCTD18Q6PI47 426 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 TMPRSS11AQ6ZMR5 421 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 KCTD20Q7Z5Y7 419 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 ZNF433Q8N7K0 673 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 GJC3Q8NFK1 279 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 MND1Q9BWT6 205 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 C1orf198Q9H425 327 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 EMC7Q9NPA0 242 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 ELOVL5Q9NYP7 299 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 SCOCQ9UIL1 159 aa14.35□□□□□ -0.11
SNED1-202ENST00000342631 CAB39Q9Y376 341 aaPredicted RBP14.35□□□□□ -0.11
SNED1-202ENST00000342631 MYL12BO14950 172 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 ETV1P50549 477 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 SLC25A35Q3KQZ1 300 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 PLEKHG7Q6ZR37 379 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.34□□□□□ -0.11
SNED1-202ENST00000342631 FJX1Q86VR8 437 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 C17orf78Q8N4C9 275 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 KLHL36Q8N4N3 616 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 NANOGP1Q8N7R0 232 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 OR52N1Q8NH53 320 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 FCGR1BQ92637 280 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 BCL2L2Q92843 193 aaPredicted RBP14.34□□□□□ -0.11
SNED1-202ENST00000342631 USB1Q9BQ65 265 aaKnown RBP14.34□□□□□ -0.11
SNED1-202ENST00000342631 ZNF649Q9BS31 505 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 LHFPL6Q9Y693 200 aa14.34□□□□□ -0.11
SNED1-202ENST00000342631 C1QL1O75973 258 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 PRB1P04280 392 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 GNLYP22749 145 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 FOXG1P55316 489 aaPredicted RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 HIST1H3AP68431 136 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 ZNF85Q03923 595 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 EMX1Q04741 257 aaPredicted RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 SCRN3Q0VDG4 424 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 EIF2B1Q14232 305 aaKnown RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 SLC36A2Q495M3 483 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 SFRP5Q5T4F7 317 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 HIST2H3PS2Q5TEC6 136 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 DEGS2Q6QHC5 323 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 ZNF474Q6S9Z5 364 aaPredicted RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 KLHL24Q6TFL4 600 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 ZNF322Q6U7Q0 402 aaPredicted RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 HIST2H3AQ71DI3 136 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 SLC16A14Q7RTX9 510 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 LHFPL3Q86UP9 236 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 SYS1Q8N2H4 156 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 LRRC18Q8N456 261 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 PRR7Q8TB68 274 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 HAVCR2Q8TDQ0 301 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 THEM6Q8WUY1 208 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 NANOS1Q8WY41 292 aaKnown RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 TBX5Q99593 518 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 ALG8Q9BVK2 526 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 GALNT8Q9NY28 637 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 ASH2LQ9UBL3 628 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 GDF2Q9UK05 429 aaPredicted RBP14.33□□□□□ -0.11
SNED1-202ENST00000342631 COPS3Q9UNS2 423 aa14.33□□□□□ -0.11
SNED1-202ENST00000342631 ZFYVE26Q68DK2 2539 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 CIB4A0PJX0 185 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 EEF1E1-BLOC1S5C9J1V9 151 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 EEF1E1O43324 174 aaKnown RBP14.33□□□□□ -0.12
SNED1-202ENST00000342631 SULT1C4O75897 302 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 CLPTM1O96005 669 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 ADRA2AP08913 450 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 SMIM18P0DKX4 95 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 PSMB1P20618 241 aaKnown RBP14.33□□□□□ -0.12
SNED1-202ENST00000342631 PAX7P23759 505 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 HCCSP53701 268 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 ROM1Q03395 351 aa14.33□□□□□ -0.12
SNED1-202ENST00000342631 IGFBP7Q16270 282 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms