RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FAM201AQ5SY85 155 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 C10orf128Q5T292 105 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 GPR157Q5UAW9 335 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 SLC27A4Q6P1M0 643 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 MUC20Q8N307 709 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 MRAPQ8TCY5 172 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 C10orf82Q8WW14 230 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 FAM71F1Q96KD3 344 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 ZNF607Q96SK3 696 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 PAIP1Q9H074 479 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 LGALS13Q9UHV8 139 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 C5orf63A6NC05 138 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 C5orf58C9J3I9 102 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 C22orf46C9J442 243 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 H3BSA7 217 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 CLIC1O00299 241 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 F13BP05160 661 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 EPHA3P29320 983 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 SGCAQ16586 387 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 LYPD2Q6UXB3 125 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 TSPYL5Q86VY4 417 aaPredicted RBP13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 ZSCAN4Q8NAM6 433 aaPredicted RBP13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 ASB10Q8WXI3 467 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 NMD3Q96D46 503 aaKnown RBP13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 C4orf45Q96LM5 186 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 PCGF1Q9BSM1 259 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 OR2H1Q9GZK4 316 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 NANSQ9NR45 359 aa13.6□□□□□ -0.23
NECTIN1-202ENST00000340882 IGHV3-64DA0A0J9YX35 117 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 CENPVL3A0A0U1RRI6 287 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 M0R3H8 397 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 KPNA4O00629 521 aaPredicted RBP13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 SLC22A3O75751 556 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 ASAH2BP0C7U1 165 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 BGNP21810 368 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 TNFSF4P23510 183 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 RPL15P61313 204 aaKnown RBP13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 TAF11Q15544 211 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 NPTX1Q15818 432 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 SWT1Q5T5J6 900 aaKnown RBP13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 NSMAFQ92636 917 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 GTF2H4Q92759 462 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 ITCHQ96J02 903 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 TBX15Q96SF7 602 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 MCHR1Q99705 422 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 KCNN2Q9H2S1 579 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 MIOXQ9UGB7 285 aa13.59□□□□□ -0.23
NECTIN1-202ENST00000340882 DNAH9Q9NYC9 4486 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 BLOC1S5-TXNDC5H3BN57 136 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 MMP9P14780 707 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 ACADSP16219 412 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 CFHR2P36980 270 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 IER3P46695 156 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 PITPNBP48739 271 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 UGT2B15P54855 530 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 BPIFB3P59826 476 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 SLC2A7Q6PXP3 512 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 UNQ6126/PRO20091Q6UXV3 157 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 ZNF841Q6ZN19 808 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 MSRB3Q8IXL7 192 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 HDAC2Q92769 488 aaKnown RBP13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 CMBLQ96DG6 245 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 SLC25A37Q9NYZ2 338 aa13.58□□□□□ -0.24
NECTIN1-202ENST00000340882 TENM3Q9P273 2699 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 CPSF4LA6NMK7 179 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 CHP2O43745 196 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 PIP5K1CO60331 668 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 OPN1MWP04001 364 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 OPN1MW2P0DN77 364 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 OPN1MW3P0DN78 364 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 KITLGP21583 273 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 LAP3P28838 519 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 AQP1P29972 269 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 PMELP40967 661 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 LOXL3P58215 753 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 HOXA4Q00056 320 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 CDK6Q00534 326 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 RPL18Q07020 188 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 FADDQ13158 208 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 ZNF404Q494X3 552 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 VAX1Q5SQQ9 334 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 FAM27BQ5VT28 67 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 WDR25Q64LD2 544 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 SLC25A47Q6Q0C1 308 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 REC114Q7Z4M0 266 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 ZER1Q7Z7L7 766 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 RANBP3LQ86VV4 465 aaPredicted RBP13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 RBM45Q8IUH3 476 aaKnown RBP13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 CLDN22Q8N7P3 220 aa13.57□□□□□ -0.24
NECTIN1-202ENST00000340882 SMYD1Q8NB12 490 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms