RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RPIAP49247 311 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ELLP55199 621 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ST3GAL3Q11203 375 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 HNF4GQ14541 408 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 CFAP161Q6P656 301 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 SLC41A3Q96GZ6 507 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF845Q96IR2 970 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RNF126Q9BV68 326 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 TMEM39BQ9GZU3 492 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 TMEM38AQ9H6F2 299 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 TAF9BQ9HBM6 251 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RAB22AQ9UL26 194 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 POLR3KQ9Y2Y1 108 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PRG3Q9Y2Y8 225 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 CACNA1CQ13936 2221 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ARID1BQ8NFD5 2236 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 TRAV18A0A075B6X5 111 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 TMEM269A0A1B0GVZ9 245 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 A6NIZ1 184 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 C17orf105B2RV13 164 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 H7C417 338 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 DVL1O14640 695 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF264O43296 627 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 FCMRO60667 390 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 AKAIN1P0CW23 69 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 RPS2P15880 293 aaKnown RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 GALP22466 123 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 FGF8P55075 233 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 CD81P60033 236 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 RAP1BP61224 184 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 SKP1P63208 163 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF85Q03923 595 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ZP2Q05996 745 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 PGGHGQ32M88 737 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 STEAP1BQ6NZ63 245 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 C1orf94Q6P1W5 598 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 CD163Q86VB7 1156 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 MFSD8Q8NHS3 518 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF563Q8TA94 476 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 RAB39BQ96DA2 213 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 NUDT11Q96G61 164 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 PCED1BQ96HM7 432 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 PGAM5Q96HS1 289 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 SHDQ96IW2 340 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 HHIPL1Q96JK4 782 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ALKBH7Q9BT30 221 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 CST11Q9H112 138 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 SLC32A1Q9H598 525 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 CXorf36Q9H7Y0 433 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 MTFP1Q9UDX5 166 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 MRPS2Q9Y399 296 aaKnown RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 J3QRE1 110 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 HCRTR2O43614 444 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 OR2J2O76002 312 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 DFFBO76075 338 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 LCATP04180 440 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 EPCAMP16422 314 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 CCR4P51679 360 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 MRPL49Q13405 166 aaKnown RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 TDRG1Q3Y452 100 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 FAHD2BQ6P2I3 314 aaPredicted RBP8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 MBOAT2Q6ZWT7 520 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 SLC16A14Q7RTX9 510 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 SCN4BQ8IWT1 228 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF100Q8IYN0 542 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 FAHD2AQ96GK7 314 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 POTEKPQ9BYX7 375 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 OR2J1Q9GZK6 312 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 KATNBL1Q9H079 304 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 SRPK3Q9UPE1 567 aa8.74□□□□□ -1.01
PTCHD4-201ENST00000339488 GOLGA4Q13439 2230 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF320A2RRD8 509 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 GLSO94925 669 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ITGB2P05107 769 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ALPPL2P10696 532 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 AKR1C4P17516 323 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SRMP19623 302 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 RPS12P25398 132 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 PSMB6P28072 239 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 NAA10P41227 235 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 RPS11P62280 158 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 P2RY6Q15077 328 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ENTPD8Q5MY95 495 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 DMKNQ6E0U4 476 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 GRASPQ7Z6J2 395 aaPredicted RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 LHFPL4Q7Z7J7 247 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 TMPRSS12Q86WS5 348 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 MRPL41Q8IXM3 137 aaKnown RBP8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 TAAR8Q969N4 342 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 HAVCR1Q96D42 359 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 GNRHR2Q96P88 292 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF426Q9BUY5 554 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SYT4Q9H2B2 425 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 PLEKHA2Q9HB19 425 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 NRIP3Q9NQ35 241 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SAGE1Q9NXZ1 904 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 ST6GALNAC2Q9UJ37 374 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 VSIG4Q9Y279 399 aa8.73□□□□□ -1.01
PTCHD4-201ENST00000339488 SCN5AQ14524 2016 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 243.2 ms