RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LHFPL6Q9Y693 200 aa13.02□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 AHRRA9YTQ3 701 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GPX5O75715 221 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SULT1C4O75897 302 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KRT33AO76009 404 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RPP14O95059 124 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ABHD16AO95870 558 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 WNT11O96014 354 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 MSR1P21757 451 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NCS1P62166 190 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SIRPAP78324 504 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SPCS2Q15005 226 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ARL9Q6T311 187 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KRT77Q7Z794 578 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR52N5Q8NH56 324 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ST7LQ8TDW4 575 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NABP1Q96AH0 204 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR8B4Q96RC9 309 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TM9SF2Q99805 663 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 BCL7BQ9BQE9 202 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NELFAQ9H3P2 528 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ELOVL3Q9HB03 270 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GPR35Q9HC97 309 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLC7A10Q9NS82 523 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ST6GALNAC2Q9UJ37 374 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 STUB1Q9UNE7 303 aa13.01□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PRRC2CQ9Y520 2896 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 A0A1W2PPW3 197 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PCSK6P29122 969 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 AGTR1P30556 359 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CRYBB2P43320 205 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ROR2Q01974 943 aaKnown RBP13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLC3A1Q07837 685 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GPR50Q13585 617 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CEACAM16Q2WEN9 425 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TIMM50Q3ZCQ8 353 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ACSF3Q4G176 576 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RIPPLY2Q5TAB7 128 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 KCTD18Q6PI47 426 aaPredicted RBP13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF679Q8IYX0 411 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TEX19Q8NA77 164 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CPT1CQ8TCG5 803 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 APH1AQ96BI3 265 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 DCUN1D5Q9BTE7 237 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CENPOQ9BU64 300 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TMED9Q9BVK6 235 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF416Q9BWM5 594 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 MROQ9BYG7 248 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 LINC00470Q9BZP3 86 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PRORYQ9H606 182 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 C12orf49Q9H741 205 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GP6Q9HCN6 339 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CHD8Q9HCK8 2581 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 DOCK7Q96N67 2140 aa13□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TMEM8BA6NDV4 472 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OGG1O15527 345 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PLPP2O43688 288 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TPOP07202 933 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GABRA5P31644 462 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 LSM6P62312 80 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ROM1Q03395 351 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 DMKNQ6E0U4 476 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RPL22L1Q6P5R6 122 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ZNF100Q8IYN0 542 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 LRRC18Q8N456 261 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR2AJ1Q8NGZ0 328 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 RNF166Q96A37 237 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TRMT61AQ96FX7 289 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GMPPAQ96IJ6 420 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 MAP6Q96JE9 813 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 C1orf198Q9H425 327 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 ASH2LQ9UBL3 628 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GDF2Q9UK05 429 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 PIEZO2Q9H5I5 2752 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TRIM64BA6NI03 449 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SLC22A1O15245 554 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SS18L1O75177 396 aaPredicted RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 MRPS34P82930 218 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CDK5R1Q15078 307 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CCDC58Q4VC31 144 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 OR7E24Q6IFN5 339 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CFAP77Q6ZQR2 320 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 EGFL6Q8IUX8 553 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GCNT2Q8N0V5 402 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 NDNFQ8TB73 568 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 HSD17B8Q92506 261 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 WNT2BQ93097 391 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SNRNP40Q96DI7 357 aaKnown RBP12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 GLRX2Q9NS18 164 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 TMEM38BQ9NVV0 291 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 UPB1Q9UBR1 384 aa12.99□□□□□ -0.33
CDK5RAP3-201ENST00000338399 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms