RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CCR6P51684 374 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 FOXF1Q12946 379 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 C6orf15Q6UXA7 325 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 YRDCQ86U90 279 aaKnown RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SUN5Q8TC36 379 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 ZBTB8AQ96BR9 441 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 RAB39BQ96DA2 213 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 PARPBPQ9NWS1 579 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 GABARAPH6UMI1 98 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 EIF4EP06730 217 aaKnown RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 GABRB1P18505 474 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 DDOSTP39656 456 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 OR6V1Q8N148 313 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 OR2I1PQ8NGU4 316 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 OR5H2Q8NGV7 314 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 NANOS1Q8WY41 292 aaKnown RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 DERL3Q96Q80 235 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 GOSR2O14653 212 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SNU13P55769 128 aaKnown RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 PCBD1P61457 104 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 C16orf47Q6ZP98 133 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 CMTM4Q8IZR5 234 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 TEX29Q8N6K0 151 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 LRRC20Q8TCA0 184 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 HAO2Q9NYQ3 351 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 BOKQ9UMX3 212 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SLC22A13Q9Y226 551 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 B4DXG7 233 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 TOX3O15405 576 aaPredicted RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 DGCR2P98153 550 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 FAPQ12884 760 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 RBMS2Q15434 407 aaKnown RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SSX8Q7RTT4 187 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 TOMM40LQ969M1 308 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 ABHD6Q9BV23 337 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 JAM3Q9BX67 310 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SRRQ9GZT4 340 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 ZSCAN5BA6NJL1 495 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 AIPO00170 330 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 RP2O75695 350 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 DBHP09172 617 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SLC2A1P11166 492 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 SLC37A1P57057 533 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 RNLSQ5VYX0 342 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 OR52I2Q8NH67 350 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 TMEM59Q9BXS4 323 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 ENKD1Q9H0I2 346 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 OR10A2Q9H208 303 aa5.7□□□□□ -1.5
PRKDC-202ENST00000338368 MRPS18AQ9NVS2 196 aaKnown RBP5.7□□□□□ -1.5
PRKDC-202ENST00000338368 ANKUB1A6NFN9 424 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CDKN2AP42771 156 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 COQ8AQ8NI60 647 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SNAPC3Q92966 411 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SERPINA2P20848 420 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 HTR2BP41595 481 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TAS2R19P59542 299 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 BTG1P62324 171 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CYCSP99999 105 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 GRK1Q15835 563 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TMEM91Q6ZNR0 172 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF501Q96CX3 271 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SGCZQ96LD1 299 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 WDFY2Q96P53 400 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 PHB2Q99623 299 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SYT3Q9BQG1 590 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 KCNE5Q9UJ90 142 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 LALBAP00709 142 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 PRH1P02810 166 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 VAMP2P63027 116 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ZNF85Q03923 595 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SLC22A6Q4U2R8 563 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 THEM4Q5T1C6 240 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 NPSR1Q6W5P4 371 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ANKRD37Q7Z713 158 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 OR56B1Q8NGI3 324 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 MAFAQ8NHW3 353 aaPredicted RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SLC6A15Q9H2J7 730 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ZMAT3Q9HA38 289 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ADGRL4Q9HBW9 690 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 LOXL2Q9Y4K0 774 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 HSPB2A8KAH6 182 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ACHEP22303 614 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SRP9P49458 86 aaKnown RBP5.69□□□□□ -1.5
PRKDC-202ENST00000338368 HSPB2Q16082 182 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 GSG1LQ6UXU4 331 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 Q7L0L9 218 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CCDC54Q8NEL0 328 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 PIGCQ92535 297 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 ST6GALNAC5Q9BVH7 336 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 SPEF1Q9Y4P9 236 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 FTCDNL1E5RQL4 147 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TRAPPC2P0DI81 140 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 TRAPPC2BP0DI82 140 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 EPXP11678 715 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 LAP3P28838 519 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CRYBA2P53672 197 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 CDC20Q12834 499 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 C17orf47Q8NEP4 570 aa5.69□□□□□ -1.5
PRKDC-202ENST00000338368 FBLIM1Q8WUP2 373 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms