RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CD47Q08722 323 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 CDK5R2Q13319 367 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 ZMYND11Q15326 602 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 TAF11Q15544 211 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 CYP51A1Q16850 503 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 SPATC1Q76KD6 591 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 ALDH16A1Q8IZ83 802 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 NSMAFQ92636 917 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 TMIGD2Q96BF3 282 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 NMD3Q96D46 503 aaKnown RBP9.66□□□□□ -0.86
CSMD2-202ENST00000338325 PRSS27Q9BQR3 290 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 OR2H1Q9GZK4 316 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 PCDHAC1Q9H158 963 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 WNT5BQ9H1J7 359 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 LRCH1Q9Y2L9 728 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 IGHV3OR16-10A0A075B7F0 116 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 M0QX08 132 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 OR7A10O76100 309 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 GPANK1O95872 356 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 MT-ND1P03886 318 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 PPIAL4GP0DN37 164 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 CD247P20963 164 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 OMGP23515 440 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 MDH2P40926 338 aaKnown RBP9.66□□□□□ -0.86
CSMD2-202ENST00000338325 AQP2P41181 271 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 PSG7Q13046 419 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 ARMC4Q5T2S8 1044 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 FAM27BQ5VT28 67 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 C16orf87Q6PH81 154 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 SLC25A47Q6Q0C1 308 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 HDAC2Q92769 488 aaKnown RBP9.66□□□□□ -0.86
CSMD2-202ENST00000338325 C4orf45Q96LM5 186 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 SAMD8Q96LT4 415 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 SIGLEC11Q96RL6 698 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 IL20RAQ9UHF4 553 aa9.66□□□□□ -0.86
CSMD2-202ENST00000338325 DOCK11Q5JSL3 2073 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 TRAV40A0A0B4J280 105 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 A0A1B0GUS0 222 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 NPIPB13A6NJU9 1138 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 NPIPB4C9JG80 1138 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 ERLIN1O75477 346 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 TGDSO95455 350 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 PLATP00750 562 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 KNG1P01042 644 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 CST2P09228 141 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 TSPAN19P0C672 248 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 FUT1P19526 365 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 GSTM3P21266 225 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 LAP3P28838 519 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 CD80P33681 288 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 PCGF2P35227 344 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 SLC18A1P54219 525 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 PCBD1P61457 104 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 RUNDC3AQ59EK9 446 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 ZNF774Q6NX45 483 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 ARL9Q6T311 187 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 DLEU7Q6UYE1 221 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 PATL1Q86TB9 770 aaKnown RBP9.65□□□□□ -0.86
CSMD2-202ENST00000338325 JAZF1Q86VZ6 243 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 SLC30A8Q8IWU4 369 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 MUC20Q8N307 709 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-202ENST00000338325 NPEPL1Q8NDH3 523 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 OR2Z1Q8NG97 314 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 MOSPD2Q8NHP6 518 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 PFN4Q8NHR9 129 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 ITLN1Q8WWA0 313 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 WFDC12Q8WWY7 111 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 UPRTQ96BW1 309 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 SGTBQ96EQ0 304 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 NANOGQ9H9S0 305 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 MAN2C1Q9NTJ4 1040 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 NKIRAS1Q9NYS0 192 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.65□□□□□ -0.86
CSMD2-202ENST00000338325 PPP1R3CQ9UQK1 317 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 TIMM10BQ9Y5J6 103 aa9.65□□□□□ -0.86
CSMD2-202ENST00000338325 SOX21Q9Y651 276 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-202ENST00000338325 V9GYY5 206 aaPredicted RBP9.65□□□□□ -0.86
CSMD2-202ENST00000338325 MDFIC2A0A1B0GVS7 189 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 CEACAM18A8MTB9 384 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 SURF4O15260 269 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 ABHD16AO95870 558 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 IGF2P01344 180 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 RBM34P42696 430 aaKnown RBP9.64□□□□□ -0.87
CSMD2-202ENST00000338325 PAX2Q02962 417 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 AGKQ53H12 422 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 BTNL3Q6UXE8 466 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 LRRN1Q6UXK5 716 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 Q6ZR03 302 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 C17orf107Q6ZR85 190 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 SLC26A7Q8TE54 656 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 TAMM41Q96BW9 452 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 THOC1Q96FV9 657 aaKnown RBP9.64□□□□□ -0.87
CSMD2-202ENST00000338325 ALG12Q9BV10 488 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 SSBP3Q9BWW4 388 aaPredicted RBP9.64□□□□□ -0.87
CSMD2-202ENST00000338325 TXNIPQ9H3M7 391 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 POFUT1Q9H488 388 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 IL19Q9UHD0 177 aa9.64□□□□□ -0.87
CSMD2-202ENST00000338325 NDRG4Q9ULP0 352 aaKnown RBP9.64□□□□□ -0.87
CSMD2-202ENST00000338325 IGHV2-70DA0A0C4DH43 119 aa9.63□□□□□ -0.87
CSMD2-202ENST00000338325 TMEM178BH3BS89 294 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms