RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 METTL11BQ5VVY1 283 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ZNF595Q8IYB9 648 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 OR4C16Q8NGL9 310 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 CAMK2AQ9UQM7 478 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 A0A087WUJ7 227 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TEX13DA0A0J9YY54 714 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 TEX51A0A1B0GUA7 166 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 SRPX2O60687 465 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 LINC00271P0C7V0 271 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ZNF43P17038 809 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 NFYAP23511 347 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 SLC6A1P30531 599 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ACAA2P42765 397 aaKnown RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 ZNF117Q03924 483 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 WDR38Q5JTN6 314 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TOR2AQ5JU69 321 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 UBE2NLQ5JXB2 153 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 PAPD4Q6PIY7 484 aaKnown RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 FAM57BQ71RH2 274 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ZNF767PQ75MW2 155 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 Q7L0L9 218 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 THAP6Q8TBB0 222 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 SLC39A7Q92504 469 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TCTN2Q96GX1 697 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 WDFY2Q96P53 400 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 STACQ99469 402 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 MARVELD1Q9BSK0 173 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 TMEM231Q9H6L2 316 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 NARFLQ9H6Q4 476 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 LYRM4Q9HD34 91 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 CA10Q9NS85 328 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 FRRS1LQ9P0K9 344 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ASH2LQ9UBL3 628 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 ABCA4P78363 2273 aa7.45□□□□□ -1.22
HPS4-201ENST00000336873 MN1Q10571 1320 aaPredicted RBP7.45□□□□□ -1.22
HPS4-201ENST00000336873 MED19A0JLT2 244 aaPredicted RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 F5H5P2 479 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 TGFBR3LH3BV60 316 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 NUDT21O43809 227 aaKnown RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 NXPH3O95157 252 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 CD34P28906 385 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 TSFMP43897 325 aaKnown RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 NPY4RP50391 375 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 P2RX1P51575 399 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 EMP2P54851 167 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 FOXK1P85037 733 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 TNK1Q13470 666 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 STEAP1BQ6NZ63 245 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 PLXDC1Q8IUK5 500 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 TDHQ8IZJ6 230 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 NPEPL1Q8NDH3 523 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 STT3BQ8TCJ2 826 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 OR2M2Q96R28 347 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 ANKRD19PQ9H560 264 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 MMP25Q9NPA2 562 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 SLC39A1Q9NY26 324 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 MLXQ9UH92 298 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 GPN3Q9UHW5 284 aaPredicted RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 FAM230AA0A1W2PPH8 454 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 FOXS1O43638 330 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 NKX2-2O95096 273 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 ABOP16442 354 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 GNB3P16520 340 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 HTR2CP28335 458 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 OTX2P32243 289 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 YPEL5P62699 121 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 SERTAD2Q14140 314 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 NLRC3Q7RTR2 1065 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 OR51E1Q8TCB6 317 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 PIGTQ969N2 578 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 POTEKPQ9BYX7 375 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 PRRG4Q9BZD6 226 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 SMOC1Q9H4F8 434 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 ASF1BQ9NVP2 202 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 MMP17Q9ULZ9 603 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 RNF215Q9Y6U7 377 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 FRMPD3Q5JV73 1810 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 MYO7BQ6PIF6 2116 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 A0A0B4J2A0 478 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 ADAM10O14672 748 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 LMX1BO60663 402 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 CSTBP04080 98 aaKnown RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 EDN3P14138 238 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 SDHAP31040 664 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 LUMP51884 338 aaPredicted RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 C1orf140Q5VVS0 124 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 CD300LDQ6UXZ3 194 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 ANGPTL5Q86XS5 388 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 PRR18Q8N4B5 295 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 TMEM185AQ8NFB2 350 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 PGAM5Q96HS1 289 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 PLEK2Q9NYT0 353 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 SHPKQ9UHJ6 478 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 MRM2Q9UI43 246 aaKnown RBP7.44□□□□□ -1.22
HPS4-201ENST00000336873 NUP50Q9UKX7 468 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 HHLA2Q9UM44 414 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms