RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 BARX1Q9HBU1 254 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 MRPL16Q9NX20 251 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CRLS1Q9UJA2 301 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ENTPD2Q9Y5L3 495 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 MFSD2BA6NFX1 497 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR5B21A6NL26 309 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PRSS47A8MTI9 375 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 GUSBP08236 651 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 TBXA2RP21731 343 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 NTHL1P78549 312 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 GRM2Q14416 872 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 RNASE12Q5GAN4 147 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 NCMAPQ5T1S8 102 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 RPUSD3Q6P087 351 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 LYPD4Q6UWN0 246 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FBXW5Q969U6 566 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 NPFFR1Q9GZQ6 430 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC25A18Q9H1K4 315 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 METTL7AQ9H8H3 244 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FBXL2Q9UKC9 423 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 AHDC1Q5TGY3 1603 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 MEGF6O75095 1541 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ATP5LO75964 103 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 EPHA8P29322 1005 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 MEF2CQ06413 473 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 BAP18Q8IXM2 172 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PNKDQ8N490 385 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 DCBLD1Q8N8Z6 715 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 OR2T33Q8NG76 320 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 Q9N2K0 584 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CLCF1Q9UBD9 225 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 MYO16Q9Y6X6 1858 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 hCG_1818297A0A087WSY0 165 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 A8MT66 165 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CRXO43186 299 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CBR1P16152 277 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 RAB38P57729 211 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CDK6Q00534 326 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 LAMTOR4Q0VGL1 99 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM71E1Q6IPT2 247 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZMIZ2Q8NF64 920 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 WDR61Q9GZS3 305 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CNOT2Q9NZN8 540 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 IFITM5A6NNB3 132 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF749O43361 778 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 XRCC3O43542 346 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 HCRTR1O43613 425 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PTP4A3O75365 173 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 C8GP07360 202 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ESDP10768 282 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 LAMP2P13473 410 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PCBD1P61457 104 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FPGSQ05932 587 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CDK5R2Q13319 367 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CDC42EP5Q6NZY7 148 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 TEX26Q8N6G2 289 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 UCN3Q969E3 161 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM204Q9BSN7 226 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CAMTA1Q9Y6Y1 1673 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 TRBV9A0A0B4J1U6 114 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 MARCH11A6NNE9 402 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 DCTN6O00399 190 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 AMHP03971 560 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 LGALS3P17931 250 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 SDHAP31040 664 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PIGAP37287 484 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 PLXDC2Q6UX71 529 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CA13Q8N1Q1 262 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADAMTS15Q8TE58 950 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 INPP5KQ9BT40 448 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 DYNLRB1Q9NP97 96 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 NAGKQ9UJ70 344 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF727A8MUV8 499 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CXCR6O00574 342 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CDC42EP2O14613 210 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 SPEM2Q0P670 501 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF816Q0VGE8 651 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 OXA1LQ15070 435 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CNIH2Q6PI25 160 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 KCTD18Q6PI47 426 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ZNF534Q76KX8 674 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 FAM86B1Q8N7N1 296 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 NELL2Q99435 816 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 SLC30A3Q99726 388 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 C20orf27Q9GZN8 174 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 ITM2CQ9NQX7 267 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 DISP2A7MBM2 1401 aa5.6□□□□□ -1.51
CDC42BPA-201ENST00000334218 J3QR06 171 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GLI1P08151 1106 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ADORA2AP29274 412 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 ATP4BP51164 291 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 NRLP54845 237 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 RPS25P62851 125 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 DHODHQ02127 395 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 BST1Q10588 318 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 COX18Q8N8Q8 333 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 TMEM190Q8WZ59 177 aa5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 GEMIN7Q9H840 131 aaKnown RBP5.59□□□□□ -1.51
CDC42BPA-201ENST00000334218 SIRT3Q9NTG7 399 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms