RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 A0A1B0GTI1 187 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 C5orf51A6NDU8 294 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 C4orf51C9J302 202 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 C1QTNF3-AMACRE9PGA6 284 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 TMEM127O75204 238 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 PMELP40967 661 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 CLINT1Q14677 625 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 NR0B2Q15466 257 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 CST6Q15828 149 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 NKPD1Q17RQ9 610 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 GALNT16Q8N428 558 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 OR7G2Q8NG99 324 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 OR4K17Q8NGC6 315 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 MISP3Q96FF7 219 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 OR52A5Q9H2C5 316 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 CLEC1BQ9P126 229 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 COL4A3Q01955 1670 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 RDH16O75452 317 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 WNT11O96014 354 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 DDTP30046 118 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 AVPR2P30518 371 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 DIO1P49895 249 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 SKP1P63208 163 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 AGBL4Q5VU57 503 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 ZNF676Q8N7Q3 588 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 PCBD2Q9H0N5 130 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 OR2S2Q9NQN1 319 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 HEATR5BQ9P2D3 2071 aa16.43■□□□□ 0.22
PKP3-201ENST00000331563 A0A1B0GTH9 108 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 TMEM72A0PK05 275 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 POU2F2P09086 479 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 CD79AP11912 226 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 VAMP1P23763 118 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 DUSP8Q13202 625 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 TGIF1Q15583 401 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 OR10K2Q6IF99 312 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 TMEM106AQ96A25 262 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 C3orf49Q96BT1 292 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 LMF1Q96S06 567 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 SDF2Q99470 211 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 OCSTAMPQ9BR26 566 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 IKZF2Q9UKS7 526 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 CYB5AP00167 134 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 TMEM35AQ53FP2 167 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 BPIFB2Q8N4F0 458 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 FOXRED1Q96CU9 486 aaPredicted RBP16.42■□□□□ 0.22
PKP3-201ENST00000331563 LAT2Q9GZY6 243 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 SEMA6CQ9H3T2 930 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 ZMAT3Q9HA38 289 aaKnown RBP16.42■□□□□ 0.22
PKP3-201ENST00000331563 CAPN10Q9HC96 672 aa16.42■□□□□ 0.22
PKP3-201ENST00000331563 TBC1D3KA0A087X1G2 549 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 TBC1D3FA6NER0 549 aaPredicted RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 TACSTD2P09758 323 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 NME1P15531 152 aaKnown RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 HIST1H1BP16401 226 aaKnown RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 ZNF28P17035 718 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 VASPP50552 380 aaPredicted RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 ZNF239Q16600 458 aaKnown RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 GXYLT1Q4G148 440 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 TBC1D3GQ6DHY5 549 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 IL34Q6ZMJ4 242 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ABHD13Q7L211 337 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 AMZ2Q86W34 360 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 OR4N5Q8IXE1 308 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 MICU1Q9BPX6 476 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 PIGQQ9BRB3 760 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ULBP3Q9BZM4 244 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ZNF350Q9GZX5 532 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ADAP2Q9NPF8 381 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ICAM5Q9UMF0 924 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 K7EQS6 105 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 CDC40O60508 579 aaKnown RBP eCLIP16.41■□□□□ 0.22
PKP3-201ENST00000331563 SRPX2O60687 465 aaPredicted RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 ALOX12BO75342 701 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 AGR2O95994 175 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 IFNA10P01566 189 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 APODP05090 189 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ITPRIPL2Q3MIP1 535 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 CD163Q86VB7 1156 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 OR14C36Q8NHC7 312 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 MS4A6EQ96DS6 147 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ZNF514Q96K75 400 aaPredicted RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 ADAD1Q96M93 576 aaKnown RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 PTCHD1Q96NR3 888 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 FBXO34Q9NWN3 711 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 CSAG2Q9Y5P2 127 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 FRYLO94915 3013 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 A0A087X0M5 115 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 A0A1B0GX30 115 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 PRR32B1ATL7 298 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 RNASEK-C17orf49H0YIS7 233 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 DBIP07108 87 aaKnown RBP16.41■□□□□ 0.22
PKP3-201ENST00000331563 BCL6P41182 706 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 CDK3Q00526 305 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ARHGAP11BQ3KRB8 267 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 TCEAL6Q6IPX3 200 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 ABHD17CQ6PCB6 329 aa16.41■□□□□ 0.22
PKP3-201ENST00000331563 UNQ6494/PRO21346Q6UXR6 183 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms