RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 FNDC9Q8TBE3 224 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ZFP3Q96NJ6 502 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 SLC25A18Q9H1K4 315 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 EXTL2Q9UBQ6 330 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 UPB1Q9UBR1 384 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 COL4A2P08572 1712 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 IGKV1D-42A0A075B6H8 117 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 SRP9P49458 86 aaKnown RBP14.24□□□□□ -0.13
PDGFB-201ENST00000331163 GID4Q8IVV7 300 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 RFLNBQ8N5W9 214 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF700Q9H0M5 742 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ABCG5Q9H222 651 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 FKBP14Q9NWM8 211 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ANKUB1A6NFN9 424 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 NPIPB9F8W1W9 429 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 EEF1E1O43324 174 aaKnown RBP14.24□□□□□ -0.13
PDGFB-201ENST00000331163 SLC35F2Q8IXU6 374 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 ABHD3Q8WU67 409 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 PIGQQ9BRB3 760 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 DEPPQ9NTK1 212 aa14.24□□□□□ -0.13
PDGFB-201ENST00000331163 SSNA1O43805 119 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 CBR3O75828 277 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 SPI1P17947 270 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 MAP3K8P41279 467 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 GMFBP60983 142 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 EIF2B1Q14232 305 aaKnown RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 METAP1DQ6UB28 335 aaPredicted RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 OR2M3Q8NG83 312 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 AP3S1Q92572 193 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 CMC2Q9NRP2 79 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 KCNG2Q9UJ96 466 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 CHCHD2Q9Y6H1 151 aaPredicted RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 POM121CA8CG34 1229 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 C21orf140B9A014 251 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 KLRC4-KLRK1H3BQV0 150 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 SLC22A5O76082 557 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 HSD11B1P28845 292 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 APOBEC1P41238 236 aaKnown RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 LIMS1P48059 325 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 RPL13AP3Q6NVV1 102 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 TMPRSS11FQ6ZWK6 438 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 OR4M2Q8NGB6 313 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 NEIL3Q8TAT5 605 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 M1APQ8TC57 530 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 FGF11Q92914 225 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 ZFP64Q9NPA5 681 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 MRPL15Q9P015 296 aaKnown RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 PINLYPA6NC86 204 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 ANXA2P07355 339 aaKnown RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 RPS4Y1P22090 263 aaKnown RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 GBX2P52951 348 aaPredicted RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 CDK5Q00535 292 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 SLC10A1Q14973 349 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF322Q6U7Q0 402 aaPredicted RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 CREB3L2Q70SY1 520 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 MISPQ8IVT2 679 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF680Q8NEM1 530 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 DLL3Q9NYJ7 618 aa14.23□□□□□ -0.13
PDGFB-201ENST00000331163 CNOT2Q9NZN8 540 aaKnown RBP14.23□□□□□ -0.13
PDGFB-201ENST00000331163 TP53BP1Q12888 1972 aaPredicted RBP14.22□□□□□ -0.13
PDGFB-201ENST00000331163 EML6Q6ZMW3 1958 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 ACOD1A6NK06 481 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 DVL2O14641 736 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 RRP8O43159 456 aaKnown RBP14.22□□□□□ -0.13
PDGFB-201ENST00000331163 AKAP8O43823 692 aaKnown RBP14.22□□□□□ -0.13
PDGFB-201ENST00000331163 LIPCP11150 499 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 PRKACAP17612 351 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 CXADRP78310 365 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 NTRK2Q16620 822 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 SLC25A25Q6KCM7 469 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 DPY19L2P2Q6ZN68 376 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 IDO2Q6ZQW0 420 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 TCTE3Q8IZS6 198 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 GPR137CQ8N3F9 429 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 HYLS1Q96M11 299 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 TSPAN32Q96QS1 320 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 ULBP2Q9BZM5 246 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 ANKRD19PQ9H560 264 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 KLHL21Q9UJP4 597 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 LRP4O75096 1905 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 MT-ND5P03915 603 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 TRAPPC2P0DI81 140 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 TRAPPC2BP0DI82 140 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 CTLA4P16410 223 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 WNT4P56705 351 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 FABP5Q01469 135 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 CEACAM19Q7Z692 300 aa14.22□□□□□ -0.13
PDGFB-201ENST00000331163 DCLRE1CQ96SD1 692 aaKnown RBP14.22□□□□□ -0.13
PDGFB-201ENST00000331163 CD79AP11912 226 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 CSNK1A1P48729 337 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 FXYD6P3P58550 94 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 KLHL24Q6TFL4 600 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 AAED1Q7RTV5 226 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 OR6V1Q8N148 313 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 ZNF283Q8N7M2 679 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 NANOGP1Q8N7R0 232 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 PMM1Q92871 262 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 PPP1R14AQ96A00 147 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 SLC26A1Q9H2B4 701 aa14.21□□□□□ -0.13
PDGFB-201ENST00000331163 CHST11Q9NPF2 352 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms