RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 CKLFQ9UBR5 152 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 KCNMB2Q9Y691 235 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 IGKV3D-11A0A0A0MRZ8 115 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 IGLV1-36A0A0B4J1U3 117 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 ALG1L2C9J202 215 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 CD2P06729 351 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 CTLA4P16410 223 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 RIDAP52758 137 aaKnown RBP13.82□□□□□ -0.2
BRCC3-201ENST00000330045 MFGE8Q08431 387 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-201ENST00000330045 BAMBIQ13145 260 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 EBPQ15125 230 aaKnown RBP13.82□□□□□ -0.2
BRCC3-201ENST00000330045 TOMM20Q15388 145 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 HLA-DQA1Q5Y7H0 255 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 C11orf88Q6PI97 169 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 NAXDQ8IW45 347 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 LMX1AQ8TE12 382 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 SLC25A28Q96A46 364 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 C8orf44Q96CB5 159 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 ALX4Q9H161 411 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-201ENST00000330045 TXNIPQ9H3M7 391 aa13.82□□□□□ -0.2
BRCC3-201ENST00000330045 VSX1Q9NZR4 365 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-201ENST00000330045 A0A1W2PQD3 144 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 TSPAN2O60636 221 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 ZP3P21754 424 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 HTR2CP28335 458 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 TAS2R19P59542 299 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 EIF2B1Q14232 305 aaKnown RBP13.81□□□□□ -0.2
BRCC3-201ENST00000330045 C9orf40Q8IXQ3 194 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 ABHD6Q9BV23 337 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 TMED7-TICAM2A0A0A6YYA0 188 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 SULT1C2O00338 296 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 DXOO77932 396 aaKnown RBP13.81□□□□□ -0.2
BRCC3-201ENST00000330045 ITGB2P05107 769 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 CALCRP30988 508 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 MAP2K6P52564 334 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 PLCXD2Q0VAA5 305 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 ELAVL1Q15717 326 aaKnown RBP13.81□□□□□ -0.2
BRCC3-201ENST00000330045 GLYATL3Q5SZD4 288 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 GSG1LQ6UXU4 331 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 ZNF627Q7L945 461 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 MDGA2Q7Z553 956 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 CATSPERDQ86XM0 798 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 GKN2Q86XP6 184 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 SEH1LQ96EE3 360 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 LINC00052Q96N35 136 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 POFUT1Q9H488 388 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 TAS2R4Q9NYW5 299 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 UPB1Q9UBR1 384 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 TMED7Q9Y3B3 224 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 LRP12Q9Y561 859 aa13.81□□□□□ -0.2
BRCC3-201ENST00000330045 CFAP54Q96N23 3096 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 A0A1W2PPC1 479 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 SLC22A23A1A5C7 686 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 POM121CA8CG34 1229 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 TPD52L2O43399 206 aaKnown RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 NPIPB7O75200 414 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 RAB3DO95716 219 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 LPLP06858 475 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 DCNP07585 359 aaKnown RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 POLR2HP52434 150 aaKnown RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 TAGLNQ01995 201 aaKnown RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 DUSP19Q8WTR2 217 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 CCDC107Q8WV48 283 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 POTEKPQ9BYX7 375 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 PPA2Q9H2U2 334 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 C1orf198Q9H425 327 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 DHCR7Q9UBM7 475 aaKnown RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 MELTFP08582 738 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 IGFBP3P17936 291 aaPredicted RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 PRKACBP22694 351 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 GK2Q14410 553 aaPredicted RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 PXDC1Q5TGL8 231 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 C1orf140Q5VVS0 124 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 TMEM229BQ8NBD8 167 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 ASB13Q8WXK3 278 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 RELTQ969Z4 430 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 SLC41A2Q96JW4 573 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 GAL3ST1Q99999 423 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 CHRNA10Q9GZZ6 450 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 PRMT8Q9NR22 394 aaPredicted RBP13.8□□□□□ -0.2
BRCC3-201ENST00000330045 PFDN2Q9UHV9 154 aa13.8□□□□□ -0.2
BRCC3-201ENST00000330045 A8MVM7 634 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 PLPP3O14495 311 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 PMS2P2O95744 297 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 OR4E1P0C645 316 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 FSTP19883 344 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 SORDQ00796 357 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 MELKQ14680 651 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 TMEM205Q6UW68 189 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 CGGBP1Q9UFW8 167 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-201ENST00000330045 MRPS18BQ9Y676 258 aaKnown RBP13.79□□□□□ -0.2
BRCC3-201ENST00000330045 SPAG17Q6Q759 2223 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 TCRBV16S1A1N1A0A5B0 115 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 TMEM82A0PJX8 343 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 H3BUI4 141 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 TO15178 435 aa13.79□□□□□ -0.2
BRCC3-201ENST00000330045 HOXD4P09016 255 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-201ENST00000330045 NUP62P37198 522 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms