RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 TOMM20Q15388 145 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 SFRP5Q5T4F7 317 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 TIGD3Q6B0B8 471 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF620Q6ZNG0 422 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 ERI1Q8IV48 349 aaKnown RBP5.71□□□□□ -1.5
CSTF3-201ENST00000323959 C9orf40Q8IXQ3 194 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 TAGAPQ8N103 731 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 SLC9A6Q92581 669 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 HGDQ93099 445 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 OTUB1Q96FW1 271 aaPredicted RBP5.71□□□□□ -1.5
CSTF3-201ENST00000323959 MARS2Q96GW9 593 aaKnown RBP5.71□□□□□ -1.5
CSTF3-201ENST00000323959 ITPAQ9BY32 194 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 COPS7AQ9UBW8 275 aa5.71□□□□□ -1.5
CSTF3-201ENST00000323959 PLECQ15149 4684 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 MAGEB3O15480 346 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 NME6O75414 186 aaPredicted RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 DIRAS1O95057 198 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 HMGN1P05114 100 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 CDK1P06493 297 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF12P17014 697 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 IDH3GP51553 393 aaPredicted RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 GAS1P54826 345 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF267Q14586 743 aaPredicted RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 PPA1Q15181 289 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF239Q16600 458 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 WBP2NLQ6ICG8 309 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ACSM5Q6NUN0 579 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 YRDCQ86U90 279 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ANKRD13BQ86YJ7 626 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 RBM45Q8IUH3 476 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 OR9Q2Q8NGE9 314 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 TMEM163Q8TC26 289 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 KISS1RQ969F8 398 aaPredicted RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ZG16BQ96DA0 208 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 RIBC2Q9H4K1 309 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 LIN28AQ9H9Z2 209 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 TMEM27Q9HBJ8 222 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 HAO2Q9NYQ3 351 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 EXOGQ9Y2C4 368 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 C2orf72A6NCS6 295 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 SNTNA6NMZ2 147 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 TXNDC12O95881 172 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 GSTT2P0CG29 244 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 GSTT2BP0CG30 244 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 UBL4AP11441 157 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 TNFRSF1BP20333 461 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 GALP22466 123 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 LMO1P25800 156 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 SSTR4P31391 388 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 HTR3AP46098 478 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 GIPRP48546 466 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 PIN1Q13526 163 aaPredicted RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 FHL1Q13642 323 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 NDUFA5Q16718 116 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 GPR157Q5UAW9 335 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 SLC29A4Q7RTT9 530 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 SLC46A3Q7Z3Q1 461 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 ADGRG3Q86Y34 549 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 LNX2Q8N448 690 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 PIK3R3Q92569 461 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 MAP6Q96JE9 813 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 NODALQ96S42 347 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 TEX12Q9BXU0 123 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 C16orf95Q9H693 158 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 FKRPQ9H9S5 495 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 EQTNQ9NQ60 294 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 PNO1Q9NRX1 252 aaKnown RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 PAK1IP1Q9NWT1 392 aaPredicted RBP5.7□□□□□ -1.5
CSTF3-201ENST00000323959 U3KQV3 271 aa5.7□□□□□ -1.5
CSTF3-201ENST00000323959 PLCE1Q9P212 2302 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 J3QRE1 110 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 RGS10O43665 173 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 NTN1O95631 604 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 IGHMP01871 453 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 HERPUD1Q15011 391 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 DCAF12L2Q5VW00 463 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ALKBH2Q6NS38 261 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 SLC27A4Q6P1M0 643 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 SLC22A25Q6T423 547 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ADAMTSL5Q6ZMM2 481 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ZNF367Q7RTV3 350 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 GPR141Q7Z602 305 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ATG4DQ86TL0 474 aaPredicted RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ADPRHL1Q8NDY3 354 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 OR10G3Q8NGC4 313 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 STK35Q8TDR2 534 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 UBASH3BQ8TF42 649 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 RAB2BQ8WUD1 216 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 TMEM239Q8WW34 195 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 YIPF6Q96EC8 236 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 GPR61Q9BZJ8 451 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 PRDM13Q9H4Q3 707 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 INPP5EQ9NRR6 644 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 CLN6Q9NWW5 311 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 FLRT3Q9NZU0 649 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 RPL36Q9Y3U8 105 aaKnown RBP5.69□□□□□ -1.5
CSTF3-201ENST00000323959 CLCA3PQ9Y6N3 262 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 SRRM5B3KS81 715 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 BHLHE40O14503 412 aa5.69□□□□□ -1.5
CSTF3-201ENST00000323959 ARPC3O15145 178 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms