RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 HPXP02790 462 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 CT62P0C5K7 136 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 SERPINA2P20848 420 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 CSNK1A1P48729 337 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF136P52737 540 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 H1FNTQ75WM6 255 aaPredicted RBP13.39□□□□□ -0.27
TCOF1-201ENST00000323668 PRSS42Q7Z5A4 293 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 CDH26Q8IXH8 852 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 RPS10P5Q9NQ39 176 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 MYOFQ9NZM1 2061 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 IMPA2O14732 288 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 PMP2P02689 132 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 ERGP11308 486 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 PPA1Q15181 289 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 SMIM3Q9BZL3 60 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 MMP25Q9NPA2 562 aa13.39□□□□□ -0.27
TCOF1-201ENST00000323668 MED6O75586 246 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 LCATP04180 440 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 APEHP13798 732 aaKnown RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 PDSS1Q5T2R2 415 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 FAM174AQ8TBP5 190 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 RSPRY1Q96DX4 576 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 BORCS8Q96FH0 119 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 LRRC3BQ96PB8 259 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 DNTTIP1Q9H147 329 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 NUDT21O43809 227 aaKnown RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 MGMTP16455 207 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 GABRR1P24046 479 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 FUT5Q11128 374 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 MDGA2Q7Z553 956 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 CLCC1Q96S66 551 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 GAS2L1Q99501 681 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 FLRT3Q9NZU0 649 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 B9D1Q9UPM9 204 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 ADRB1P08588 477 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 MESP2Q0VG99 397 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 RTL6Q6ICC9 239 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 TMEM81Q6P7N7 255 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 C17orf107Q6ZR85 190 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 OR10R2Q8NGX6 335 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 ASB13Q8WXK3 278 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 TTC9Q92623 222 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 TRAF4Q9BUZ4 470 aaPredicted RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 KCNJ16Q9NPI9 418 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 TNS1Q9HBL0 1735 aaKnown RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 TRBV11-1A0A0K0K1C0 115 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 ZFAND5O76080 213 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 CDKN2AP42771 156 aaKnown RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 PWWP2BQ6NUJ5 590 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 TXNIPQ9H3M7 391 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 UNKLQ9H9P5 680 aaKnown RBP13.38□□□□□ -0.27
TCOF1-201ENST00000323668 B3GALT1Q9Y5Z6 326 aa13.38□□□□□ -0.27
TCOF1-201ENST00000323668 K7EPK0 472 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 WDPCPO95876 746 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 BLVRBP30043 206 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-201ENST00000323668 SELENOPP49908 381 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 CAV2P51636 162 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 FJX1Q86VR8 437 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 GPR137CQ8N3F9 429 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 FAM71E2Q8N5Q1 922 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 FAM181AQ8N9Y4 354 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OR5D18Q8NGL1 313 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OTOSQ8NHW6 89 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OR8B4Q96RC9 309 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OR11A1Q9GZK7 315 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 S1PR5Q9H228 398 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 PARPBPQ9NWS1 579 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 HRH3Q9Y5N1 445 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OTOFQ9HC10 1997 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 IGKV1-8A0A0C4DH67 115 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ICOSLGO75144 302 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 CBX7O95931 251 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 NPY4RP50391 375 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 LGALSLQ3ZCW2 172 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-201ENST00000323668 GLIPR1L1Q6UWM5 242 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 CCDC71LQ8N9Z2 235 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ST8SIA2Q92186 375 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ENKD1Q9H0I2 346 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 GHITMQ9H3K2 345 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ANKRD20A5PA0PJZ0 165 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 HLXQ14774 488 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-201ENST00000323668 FGF14Q92915 247 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 KTI12Q96EK9 354 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-201ENST00000323668 CA14Q9ULX7 337 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 TET1Q8NFU7 2136 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ZNF638Q14966 1978 aaKnown RBP13.37□□□□□ -0.27
TCOF1-201ENST00000323668 MCRIP1C9JLW8 97 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 TMEM176BQ3YBM2 270 aaPredicted RBP13.37□□□□□ -0.27
TCOF1-201ENST00000323668 FAM122BQ7Z309 247 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OR52N5Q8NH56 324 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 ABHD6Q9BV23 337 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 OR10A2Q9H208 303 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 CHRDQ9H2X0 955 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 GAREM1Q9H706 876 aa13.37□□□□□ -0.27
TCOF1-201ENST00000323668 SBF1O95248 1867 aa13.36□□□□□ -0.27
TCOF1-201ENST00000323668 LINC00862A6NCI5 91 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms