RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 A0A1B0GUH1 482 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 CD14P08571 375 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 OR8U9P0C7N5 309 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 GAAP10253 952 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 PEBP1P30086 187 aaKnown RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 TNFRSF4P43489 277 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 CBX5P45973 191 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 EMP2P54851 167 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 MFSD13AQ14CX5 517 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 PLA1AQ53H76 456 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 AWAT2Q6E213 333 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 MAMSTRQ6ZN01 415 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 RNF113BQ8IZP6 322 aaKnown RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 STPG2Q8N412 459 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 SEMA6CQ9H3T2 930 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 DOCK9Q9BZ29 2069 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 SUSD5O60279 629 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 SNAPC5O75971 98 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 MRPS10P82664 201 aaKnown RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 C1QL3Q5VWW1 255 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 TMEM91Q6ZNR0 172 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 ZNF679Q8IYX0 411 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 OR1M1Q8NGA1 313 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 ST6GALNAC5Q9BVH7 336 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 C8orf33Q9H7E9 229 aaPredicted RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 ZFP64Q9NPA5 681 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 MED17Q9NVC6 651 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 C2orf42Q9NWW7 574 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 SIRT4Q9Y6E7 314 aaPredicted RBP13.88□□□□□ -0.19
VARS2-201ENST00000321897 PSME4Q14997 1843 aa13.88□□□□□ -0.19
VARS2-201ENST00000321897 IFITM5A6NNB3 132 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 ZNF749O43361 778 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 SEMA7AO75326 666 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 OTX2P32243 289 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 GLO1Q04760 184 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 LRRC18Q8N456 261 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 MORN4Q8NDC4 146 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 KCNG2Q9UJ96 466 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 TRBV11-1A0A0K0K1C0 115 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 SHISA3A0PJX4 238 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 SLC22A23A1A5C7 686 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 ZNF705GA8MUZ8 300 aaPredicted RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 P2RY10O00398 339 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 JMJD7P0C870 316 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 CALCBP10092 127 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 NQO2P16083 231 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 TAS2R19P59542 299 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 RHEBQ15382 184 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 ETFDHQ16134 617 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 GLYATL3Q5SZD4 288 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 ZNF417Q8TAU3 575 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 WDR34Q96EX3 536 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 PGAM5Q96HS1 289 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 GHITMQ9H3K2 345 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 PIGMQ9H3S5 423 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 KCNK15Q9H427 330 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 ASH2LQ9UBL3 628 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 C4orf47A7E2U8 309 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 TRIM77I1YAP6 450 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 FABP1P07148 127 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 NDUFA6P56556 154 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 B3GNTL1Q67FW5 361 aaPredicted RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 PNLDC1Q8NA58 520 aaKnown RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 BVESQ8NE79 360 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 OR5T1Q8NG75 326 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 OR1S2Q8NGQ3 325 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 HSD17B8Q92506 261 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 APMAPQ9HDC9 416 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 TMEM74BQ9NUR3 256 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 C14orf166Q9Y224 244 aaKnown RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 SIGLEC7Q9Y286 467 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 COA3Q9Y2R0 106 aaPredicted RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 LSM2Q9Y333 95 aaKnown RBP13.87□□□□□ -0.19
VARS2-201ENST00000321897 C5orf42Q9H799 3197 aa13.87□□□□□ -0.19
VARS2-201ENST00000321897 TMEM235A6NFC5 223 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 K7EQS6 105 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 ICOSLGO75144 302 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 PNMTP11086 282 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 ZNF43P17038 809 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 BDKRB2P30411 391 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 P2RX1P51575 399 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 S100A12P80511 92 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 MUC20Q8N307 709 aaPredicted RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 OR52H1Q8NGJ2 320 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 PPP1R1CQ8WVI7 109 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 PTGES2Q9H7Z7 377 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 TAS2R5Q9NYW4 299 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 RARRES3Q9UL19 164 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 DTX4Q9Y2E6 619 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 C17orf51A8MQB3 221 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 CXCL2P19875 107 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 AVPR2P30518 371 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 MMP15P51511 669 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 SNRPNP63162 240 aaKnown RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 MRPS21P82921 87 aaKnown RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 RPL18Q07020 188 aaKnown RBP13.86□□□□□ -0.19
VARS2-201ENST00000321897 CHRDL2Q6WN34 429 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 RHBDD3Q9Y3P4 386 aa13.86□□□□□ -0.19
VARS2-201ENST00000321897 A0A1W2PNR3 127 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms