RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 APH1AQ96BI3 265 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 SEH1LQ96EE3 360 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 TNFRSF13CQ96RJ3 184 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 PARP12Q9H0J9 701 aaKnown RBP15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 PTAFRP25105 342 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 HSF1Q00613 529 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 LILRA2Q8N149 483 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 PAAF1Q9BRP4 392 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 PLCH1Q4KWH8 1693 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 ABHD16AO95870 558 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 SOD1P00441 154 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 CLEC2DQ9UHP7 191 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 RD3LP0DJH9 198 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 CD80P33681 288 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF718Q3SXZ3 478 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 LRRTM1Q86UE6 522 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 ADIPOR2Q86V24 386 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 ULBP3Q9BZM4 244 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 TOLLIPQ9H0E2 274 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 CD14P08571 375 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 ISL2Q96A47 359 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 MACROD1Q9BQ69 325 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 UTS2O95399 124 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 NME1P15531 152 aaKnown RBP15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 ZP3P21754 424 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 USF1P22415 310 aaPredicted RBP15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 DMWDQ09019 674 aa15.52■□□□□ 0.08
SMCHD1-201ENST00000320876 SMAD6O43541 496 aaKnown RBP15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 SELENOFO60613 162 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 AMIGO3Q86WK7 504 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 TMEM130Q8N3G9 435 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 CPXM2Q8N436 756 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 LGI1O95970 557 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 TIGITQ495A1 244 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 OR2T2Q6IF00 324 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 TCTE3Q8IZS6 198 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 PRDX1Q06830 199 aaKnown RBP15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 FAM174AQ8TBP5 190 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 TVP23CQ96ET8 276 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 SYT14P1Q58G82 188 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 TBPL2Q6SJ96 375 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 ANGPTL5Q86XS5 388 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 RREB1Q92766 1687 aa15.52■□□□□ 0.07
SMCHD1-201ENST00000320876 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 A6NL46 340 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 RFPL4AA6NLU0 287 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 DRGXA6NNA5 263 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 RFPL4AL1F8VTS6 287 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 HNF1AP20823 631 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 MED25Q71SY5 747 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 SMIM7Q9BQ49 75 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 A0A1B0GUH1 482 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 SERTM2A0A1B0GWG4 89 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 PIGQQ9BRB3 760 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 PRSS21Q9Y6M0 314 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 TERTO14746 1132 aaKnown RBP15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 CER1O95813 267 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 ACSM4P0C7M7 580 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 ZNF768Q9H5H4 540 aaKnown RBP15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 OPN1LWP04000 364 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 GLAP06280 429 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 DCXRQ7Z4W1 244 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 PLEKHA2Q9HB19 425 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 G0S2P27469 103 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 PLXDC2Q6UX71 529 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 GDPD3Q7L5L3 318 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 ANGPTL6Q8NI99 470 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 SHARPINQ9H0F6 387 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 SNRPGP15A8MWD9 76 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 MOGAT2Q3SYC2 334 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 ZNF583Q96ND8 569 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 SLC22A12Q96S37 553 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 TOPAZ1Q8N9V7 1692 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 WNT11O96014 354 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 ADRA1AP35348 466 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 CARD18P57730 90 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 TMEM123Q8N131 208 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 OR2AE1Q8NHA4 323 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 HAPLN2Q9GZV7 340 aa15.51■□□□□ 0.07
SMCHD1-201ENST00000320876 PPP6CO00743 305 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 BAMBIQ13145 260 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 ZNF534Q76KX8 674 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 C19orf47Q8N9M1 422 aaKnown RBP15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 FLVCR1Q9Y5Y0 555 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 TRAV20A0A0B4J274 112 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 GABRB1P18505 474 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 PSMB5P28074 263 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 IHHQ14623 411 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 Q1RN00 199 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 SLC38A6Q8IZM9 456 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 NIPSNAP1Q9BPW8 284 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 BARX1Q9HBU1 254 aaPredicted RBP15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 H0YGG7 62 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 MTHFD2P13995 350 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 SELEP16581 610 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 SLC6A11P48066 632 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 EMC4Q5J8M3 183 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 VHLLQ6RSH7 139 aa15.5■□□□□ 0.07
SMCHD1-201ENST00000320876 LINC00346Q8IVM7 164 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms