RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 C4orf47A7E2U8 309 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 DISC1C4P0D8 188 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 GDF9O60383 454 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 IGKV1D-16P01601 117 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 GPR3P46089 330 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 ODF4Q2M2E3 257 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 FAM220AQ7Z4H9 259 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 D2HGDHQ8N465 521 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 OR51D1Q8NGF3 324 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 TSNAXQ99598 290 aaKnown RBP15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 KCNK15Q9H427 330 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 FRRS1LQ9P0K9 344 aa15.5■□□□□ 0.07
SCAMP4-201ENST00000316097 A0A0D9SG52 128 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 CTAG2O75638 210 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ATG12O94817 140 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 RBM34P42696 430 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 HOXA1P49639 335 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ALKBH1Q13686 389 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 LRRC37A5PQ49AS3 106 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 LIPNQ5VXI9 398 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF595Q8IYB9 648 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC43A2Q8N370 569 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 C12orf45Q8N5I9 185 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 LMF1Q96S06 567 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 MESP1Q9BRJ9 268 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF471Q9BX82 626 aaPredicted RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 SCPEP1Q9HB40 452 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 RXFP3Q9NSD7 469 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 NDRG3Q9UGV2 375 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 CDV3Q9UKY7 258 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 KLHDC2Q9Y2U9 406 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 AGTR1P30556 359 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ACAA2P42765 397 aaKnown RBP15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 AKR1C2P52895 323 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 AKR1C1Q04828 323 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 HYAL4Q2M3T9 481 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC35D3Q5M8T2 416 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF684Q5T5D7 378 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 STEAP2Q8NFT2 490 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 OR10AC1Q8NH08 325 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC41A2Q96JW4 573 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 TSSK2Q96PF2 358 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 ALG12Q9BV10 488 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 STEAP1Q9UHE8 339 aa15.49■□□□□ 0.07
SCAMP4-201ENST00000316097 GP1BAP07359 652 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 OR4E1P0C645 316 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 MAP3K8P41279 467 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 ATXN7L3Q14CW9 347 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 HFEQ30201 348 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 JMJD6Q6NYC1 403 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 STEAP1BQ6NZ63 245 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 ANKRD16Q6P6B7 361 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 OR2W3Q7Z3T1 314 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 IER2Q9BTL4 223 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF768Q9H5H4 540 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 LANCL2Q9NS86 450 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 KCNK7Q9Y2U2 307 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 GPR179Q6PRD1 2367 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 UPK3AO75631 287 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 GLCEO94923 617 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TIAF1O95411 115 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 SKP1P63208 163 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TRIM61Q5EBN2 209 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 EXOSC6Q5RKV6 272 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 LINC01590Q5TEZ4 76 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC6A19Q695T7 634 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TCEAL6Q6IPX3 200 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 LEG1Q6P5S2 330 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 HAGHLQ6PII5 290 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 KIRREL2Q6UWL6 708 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 NPSR1Q6W5P4 371 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 PUSL1Q8N0Z8 303 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 SLC38A9Q8NBW4 561 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 C16orf52Q8NHV5 167 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TCEAL3Q969E4 200 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM106AQ96A25 262 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 ZNF501Q96CX3 271 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 ADAD1Q96M93 576 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 STACQ99469 402 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 ADAT1Q9BUB4 502 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TRIM2Q9C040 744 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 MKKSQ9NPJ1 570 aaPredicted RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 MRM2Q9UI43 246 aaKnown RBP15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 OR10H1Q9Y4A9 318 aa15.48■□□□□ 0.07
SCAMP4-201ENST00000316097 TACSTD2P09758 323 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 WDR74Q6RFH5 385 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 DPY19L2P2Q6ZN68 376 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 BIVMQ86UB2 503 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 PM20D2Q8IYS1 436 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 KCNRGQ8N5I3 272 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 OR51A4Q8NGJ6 313 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 VRK1Q99986 396 aaPredicted RBP15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 NMNAT2Q9BZQ4 307 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 DNAJB12Q9NXW2 375 aaKnown RBP15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 TMEM82A0PJX8 343 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 OR5H14A6NHG9 310 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 C17orf105B2RV13 164 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 H0YIG0 161 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 FBXO45P0C2W1 286 aa15.47■□□□□ 0.07
SCAMP4-201ENST00000316097 PRSS3P35030 304 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms