RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 MAP2K3P46734 347 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 ZNF57Q68EA5 555 aaPredicted RBP16.34■□□□□ 0.21
CCDC43-201ENST00000315286 UBQLNLQ8IYU4 475 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 BEST3Q8N1M1 668 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 OR10H5Q8NGA6 315 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 ADAMTS14Q8WXS8 1223 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 GPR87Q9BY21 358 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 LIN7BQ9HAP6 207 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 CENPMQ9NSP4 180 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 RYDENQ9NUL5 291 aaKnown RBP16.34■□□□□ 0.21
CCDC43-201ENST00000315286 EMC9Q9Y3B6 208 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 R4GMQ9 66 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 A0A1W2PPL8 197 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 TERTO14746 1132 aaKnown RBP16.34■□□□□ 0.21
CCDC43-201ENST00000315286 LYRM1O43325 122 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 ADRB1P08588 477 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 PRKAR1AP10644 381 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 ZNF17P17021 662 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 UBE2NLQ5JXB2 153 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 STPG1Q5TH74 334 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 FCRLAQ7L513 359 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 CMTM4Q8IZR5 234 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 SLC39A7Q92504 469 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 TRIM63Q969Q1 353 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 RFT1Q96AA3 541 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 THOC3Q96J01 351 aaKnown RBP16.34■□□□□ 0.21
CCDC43-201ENST00000315286 SEC61A2Q9H9S3 476 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 RBFOX1Q9NWB1 397 aaKnown RBP16.34■□□□□ 0.21
CCDC43-201ENST00000315286 CYB5R1Q9UHQ9 305 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 MRPS7Q9Y2R9 242 aaKnown RBP16.34■□□□□ 0.21
CCDC43-201ENST00000315286 PCDHGA1Q9Y5H4 931 aa16.34■□□□□ 0.21
CCDC43-201ENST00000315286 IGHV3-15A0A0B4J1V0 119 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 ZNF726A6NNF4 738 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 EIF1AYO14602 144 aaKnown RBP16.33■□□□□ 0.21
CCDC43-201ENST00000315286 EEF1E1O43324 174 aaKnown RBP16.33■□□□□ 0.21
CCDC43-201ENST00000315286 F10P00742 488 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 CDAP32320 146 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 EIF1AXP47813 144 aaKnown RBP16.33■□□□□ 0.21
CCDC43-201ENST00000315286 RAC1P63000 192 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 AGAP6Q5VW22 663 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 ZNF544Q6NX49 715 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 LRFN4Q6PJG9 635 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 SLC25A47Q6Q0C1 308 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 HDDC2Q7Z4H3 204 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 SUMF1Q8NBK3 374 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 ENKURQ8TC29 256 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 RNF133Q8WVZ7 376 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 CMTM3Q96MX0 182 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 AGAP4Q96P64 663 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 PIGQQ9BRB3 760 aa16.33■□□□□ 0.21
CCDC43-201ENST00000315286 A0A0J9YW62 118 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 LOC101059948A0A1B0GTJ6 334 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 C21orf140B9A014 251 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 DOK2O60496 412 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 UBL3O95164 117 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 CYB561P49447 251 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 TPTEP56180 551 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 CLDN17P56750 224 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 B3GALT5-AS1P59052 145 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 GPR85P60893 370 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 HIST3H3Q16695 136 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 MZT2BQ6NZ67 158 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 DEGS2Q6QHC5 323 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 ASB18Q6ZVZ8 466 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 YRDCQ86U90 279 aaKnown RBP16.33■□□□□ 0.2
CCDC43-201ENST00000315286 GLCCI1Q86VQ1 547 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 ZFP3Q96NJ6 502 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 UCN2Q96RP3 112 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 EMC7Q9NPA0 242 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 G6PC2Q9NQR9 355 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 DEPPQ9NTK1 212 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 STMN3Q9NZ72 180 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 OR5V1Q9UGF6 321 aa16.33■□□□□ 0.2
CCDC43-201ENST00000315286 H0YC42 278 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 TMEM127O75204 238 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 TNFSF15O95150 251 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 QDPRP09417 244 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 H2BFMP0C1H6 154 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 RFPL3SP0C7P2 107 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 SRD5A2P31213 254 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 OC90Q02509 493 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-201ENST00000315286 ASPHD2Q6ICH7 369 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 AKAP14Q86UN6 197 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 TMPRSS12Q86WS5 348 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.32■□□□□ 0.2
CCDC43-201ENST00000315286 IZUMO1Q8IYV9 350 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 CHAC2Q8WUX2 184 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 ASB5Q8WWX0 329 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 SLAMF6Q96DU3 332 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 ITPKCQ96DU7 683 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 SLC25A38Q96DW6 304 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 OR52A1Q9UKL2 312 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 CAMK2AQ9UQM7 478 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 KIAA1549Q9HCM3 1950 aa16.32■□□□□ 0.2
CCDC43-201ENST00000315286 TMEM269A0A1B0GVZ9 245 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 LRRC3CA6NJW4 275 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 ANXA2P2A6NMY6 339 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 TNFSF11O14788 317 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 EIF1BO60739 113 aaKnown RBP16.31■□□□□ 0.2
CCDC43-201ENST00000315286 ANXA2P07355 339 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms