RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 S100A10P60903 97 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 EGR3Q06889 387 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 SYT9Q86SS6 491 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 SLC22A24Q8N4F4 322 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 ZNF431Q8TF32 576 aaPredicted RBP12.34□□□□□ -0.43
DDX54-202ENST00000314045 SLC25A46Q96AG3 418 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 YIPF6Q96EC8 236 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 MICU1Q9BPX6 476 aa12.34□□□□□ -0.43
DDX54-202ENST00000314045 ANKRD33BA6NCL7 494 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 NAP1L6A6NFF2 107 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 C21orf140B9A014 251 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 L7N2F9 121 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CSF1P09603 554 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 HLA-DMAP28067 261 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 VAMP2P63027 116 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 STPG1Q5TH74 334 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 C3P1Q6ZMU1 363 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR1J2Q8NGS2 313 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 MGAT4CQ9UBM8 478 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 MRPS28Q9Y2Q9 187 aaKnown RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR6C65A6NJZ3 312 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 RAF1P04049 648 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 GP1BAP07359 652 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 ZNF44P15621 663 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 AKR1C4P17516 323 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CASP3P42574 277 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CLDN6P56747 220 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CXADRP78310 365 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 AADACL4Q5VUY2 407 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 TMEM81Q6P7N7 255 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 ATG4DQ86TL0 474 aaPredicted RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR6V1Q8N148 313 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 ZNF615Q8N8J6 731 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 STEAP2Q8NFT2 490 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR6M1Q8NGM8 313 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR2G2Q8NGZ5 317 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CPNE4Q96A23 557 aaPredicted RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 FAM3DQ96BQ1 224 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 DCLRE1CQ96SD1 692 aaKnown RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 LIN7BQ9HAP6 207 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CGGBP1Q9UFW8 167 aaPredicted RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 TIMM10BQ9Y5J6 103 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 TOXO94900 526 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 IGKV1D-16P01601 117 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 SLC25A1P53007 311 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 RIPPLY1Q0D2K3 151 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 CLN3Q13286 438 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 LRRC37A5PQ49AS3 106 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 UBE2NLQ5JXB2 153 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 VHLLQ6RSH7 139 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 KCNG3Q8TAE7 436 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 OR51E1Q8TCB6 317 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 DYNC2LI1Q8TCX1 351 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 ALKBH3Q96Q83 286 aaPredicted RBP12.33□□□□□ -0.44
DDX54-202ENST00000314045 LANCL2Q9NS86 450 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 FAIMQ9NVQ4 179 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 SLCO1C1Q9NYB5 712 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 RCE1Q9Y256 329 aa12.33□□□□□ -0.44
DDX54-202ENST00000314045 A0A096LPE4 126 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 TRGV5A0A0B4J1U4 118 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 ZNF891A8MT65 544 aaPredicted RBP12.32□□□□□ -0.44
DDX54-202ENST00000314045 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 M0R135 149 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 MSL3P1P0C860 447 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 LIMS3P0CW19 117 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 LIMS4P0CW20 117 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 GNRHRP30968 328 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
DDX54-202ENST00000314045 VEGFCP49767 419 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 SKP2Q13309 424 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 ZNF766Q5HY98 468 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 OR9K2Q8NGE7 335 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 LIPHQ8WWY8 451 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 ZNF799Q96GE5 643 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 CCDC120Q96HB5 630 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 METTL9Q9H1A3 318 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 FKBP14Q9NWM8 211 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 KCNIP1Q9NZI2 227 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 LHX6Q9UPM6 363 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 K7ESF4 209 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 HRGP04196 525 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 ANKRD34CP0C6C1 535 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 FGF5P12034 268 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 GIFP27352 417 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 RAC1P63000 192 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 AQP6Q13520 282 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 XAF1Q6GPH4 301 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 PGAP1Q75T13 922 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 CDH24Q86UP0 819 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 C11orf40Q8WZ69 217 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 TOMM40LQ969M1 308 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 PIGTQ969N2 578 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 TRIB1Q96RU8 372 aa12.32□□□□□ -0.44
DDX54-202ENST00000314045 GLTPQ9NZD2 209 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms