RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ZNF354AO60765 605 aaPredicted RBP22.75■■□□□ 1.23
HOXB3-201ENST00000311626 CSNK1EP49674 416 aaKnown RBP22.75■■□□□ 1.23
HOXB3-201ENST00000311626 RIDAP52758 137 aaKnown RBP22.75■■□□□ 1.23
HOXB3-201ENST00000311626 STEAP1BQ6NZ63 245 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 C17orf107Q6ZR85 190 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 GALNT16Q8N428 558 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 OR2AK2Q8NG84 335 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 MNTQ99583 582 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 LMAN1LQ9HAT1 526 aa22.75■■□□□ 1.23
HOXB3-201ENST00000311626 FER1L5A0AVI2 2057 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 PHYHO14832 338 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 ALOX12BO75342 701 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 OPN1LWP04000 364 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 EIF1AXP47813 144 aaKnown RBP22.74■■□□□ 1.23
HOXB3-201ENST00000311626 POLR2HP52434 150 aaKnown RBP22.74■■□□□ 1.23
HOXB3-201ENST00000311626 DLX5P56178 289 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 SEC61A1P61619 476 aaKnown RBP22.74■■□□□ 1.23
HOXB3-201ENST00000311626 TEX30Q5JUR7 227 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 SLC29A4Q7RTT9 530 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 C15orf40Q8WUR7 153 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 SLC25A28Q96A46 364 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 ARL6Q9H0F7 186 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 POFUT1Q9H488 388 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 CSF2RBP32927 897 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 NHLRC3Q5JS37 347 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 GLRX5Q86SX6 157 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 MED29Q9NX70 200 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 COPS7AQ9UBW8 275 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 EPHA6Q9UF33 1036 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 CA14Q9ULX7 337 aa22.74■■□□□ 1.23
HOXB3-201ENST00000311626 FARSAQ9Y285 508 aaKnown RBP22.74■■□□□ 1.23
HOXB3-201ENST00000311626 LOC100509620A0A075B734 347 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 DXOO77932 396 aaKnown RBP22.73■■□□□ 1.23
HOXB3-201ENST00000311626 C14orf28Q4W4Y0 310 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 TMUB2Q71RG4 321 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 CATSPERDQ86XM0 798 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 GABRG1Q8N1C3 465 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 CLEC1AQ8NC01 280 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 C12orf10Q9HB07 376 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 CENPMQ9NSP4 180 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 ZNF230Q9UIE0 474 aaPredicted RBP22.73■■□□□ 1.23
HOXB3-201ENST00000311626 VDAC3Q9Y277 283 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 A0A1W2PPC1 479 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 A8MVM7 634 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 NPIPB7O75200 414 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 ACSM4P0C7M7 580 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 ZNF28P17035 718 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 HTR2CP28335 458 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 ARRB1P49407 418 aaPredicted RBP22.73■■□□□ 1.23
HOXB3-201ENST00000311626 MECP2P51608 486 aaKnown RBP22.73■■□□□ 1.23
HOXB3-201ENST00000311626 WDR45BQ5MNZ6 344 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 OR13C3Q8NGS6 347 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 OR6N1Q8NGY5 312 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 PNPLA2Q96AD5 504 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 SEH1LQ96EE3 360 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 DMRTA2Q96SC8 542 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 FBXO4Q9UKT5 387 aa22.73■■□□□ 1.23
HOXB3-201ENST00000311626 MED12Q93074 2177 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 EIF4E2O60573 245 aaKnown RBP22.72■■□□□ 1.23
HOXB3-201ENST00000311626 CD27P26842 260 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 EPHA4P54764 986 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 HSD11B2P80365 405 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 SORDQ00796 357 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 DHODHQ02127 395 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 DCXRQ7Z4W1 244 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 OR1N1Q8NGS0 311 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 DAZLQ92904 295 aaKnown RBP22.72■■□□□ 1.23
HOXB3-201ENST00000311626 RBPMSQ93062 196 aaKnown RBP22.72■■□□□ 1.23
HOXB3-201ENST00000311626 APMAPQ9HDC9 416 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 F5H5P2 479 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 TMEM127O75204 238 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 AHSA1O95433 338 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 FBXW4P57775 412 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 IKZF1Q13422 519 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 OR7A5Q15622 319 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 FAM166AQ6J272 317 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 FDX2Q6P4F2 183 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 OR4S1Q8NGB4 309 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 ASB17Q8WXJ9 295 aa22.72■■□□□ 1.23
HOXB3-201ENST00000311626 VSX1Q9NZR4 365 aaPredicted RBP22.72■■□□□ 1.23
HOXB3-201ENST00000311626 LOC105371267A0A1B0GV96 52 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 P2RY10O00398 339 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 FADS1O60427 444 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 DNASE1L1P49184 302 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 SYT13Q7L8C5 426 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 ACBD4Q8NC06 268 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 GPX8Q8TED1 209 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 CMBLQ96DG6 245 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 EMC6Q9BV81 110 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 B3GNT4Q9C0J1 378 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 KCNN3Q9UGI6 736 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 LGALS8O00214 317 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 NKPD1Q17RQ9 610 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 KCTD18Q6PI47 426 aaPredicted RBP22.71■■□□□ 1.23
HOXB3-201ENST00000311626 OR52N5Q8NH56 324 aa22.71■■□□□ 1.23
HOXB3-201ENST00000311626 TMEM235A6NFC5 223 aa22.7■■□□□ 1.22
HOXB3-201ENST00000311626 RAB3DO95716 219 aa22.7■■□□□ 1.22
HOXB3-201ENST00000311626 MT-ATP6P00846 226 aa22.7■■□□□ 1.22
HOXB3-201ENST00000311626 S100A11P31949 105 aa22.7■■□□□ 1.22
HOXB3-201ENST00000311626 SCGB2B2Q4G0G5 96 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms