RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MS4A18H0YCH9 400 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 GLSO94925 669 aaPredicted RBP10.35□□□□□ -0.75
PTPN2-201ENST00000309660 SLC2A1P11166 492 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 PRKXP51817 358 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 BLVRAP53004 296 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 ANGPT1Q15389 498 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 MS4A18Q3C1V0 323 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 TMEM225Q6GV28 225 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 TMEM205Q6UW68 189 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 FTMTQ8N4E7 242 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 OR1J4Q8NGS1 313 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 EMC7Q9NPA0 242 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 ETV7Q9Y603 341 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 LOC100509620A0A075B734 347 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 TRBV5-7A0A0A0MS05 114 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 LOC107986453A0A1B0GWG9 222 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 ANKRD20A5PA0PJZ0 165 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 CTAG2O75638 210 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 SIX6O95475 246 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 TSPAN5P62079 268 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 CHMP1BQ7LBR1 199 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 PPP1R3BQ86XI6 285 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 KMT5CQ86Y97 462 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 ASB5Q8WWX0 329 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 DEFB126Q9BYW3 111 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 OCIAD1Q9NX40 245 aa10.35□□□□□ -0.75
PTPN2-201ENST00000309660 K7ESF4 209 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 ZP1P60852 638 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 OR4C16Q8NGL9 310 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 OIT3Q8WWZ8 545 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 MCHR2Q969V1 340 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 DDIT4LQ96D03 193 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 JSRP1Q96MG2 331 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 ELF5Q9UKW6 265 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 IGHV5-10-1A0A0J9YXX1 117 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 ANKUB1A6NFN9 424 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 PYCARD-AS1I3L0S3 204 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CELA2AP08217 269 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 EPHA8P29322 1005 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 LCN1P31025 176 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CDAP32320 146 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 PRSS3P35030 304 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 GNG2P59768 71 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 PSMA6P60900 246 aaKnown RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 NR0B2Q15466 257 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 GLT8D1Q68CQ7 371 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 C11orf88Q6PI97 169 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 DNM1P34Q6PK57 102 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 OR51S1Q8NGJ8 323 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 STK35Q8TDR2 534 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 ZNF436Q9C0F3 470 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 DLL4Q9NR61 685 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 VSX1Q9NZR4 365 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 OR52A1Q9UKL2 312 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 HHLA2Q9UM44 414 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 FARSAQ9Y285 508 aaKnown RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 TNRC18O15417 2968 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 TEX51A0A1B0GUA7 166 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 FTCDNL1E5RQL4 147 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 XRCC3O43542 346 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 NOS1APO75052 506 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CD3DP04234 171 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 DAP3P51398 398 aaKnown RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 MYBPHQ13203 477 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 HLA-BQ31612 363 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 METTL11BQ5VVY1 283 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CREB3L2Q70SY1 520 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CPEB2Q7Z5Q1 589 aaKnown RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 RABEPKQ7Z6M1 372 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CARFQ8N187 725 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 WDR89Q96FK6 387 aaPredicted RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CMTM3Q96MX0 182 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 SPACA5Q96QH8 159 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 MRI1Q9BV20 369 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CHST11Q9NPF2 352 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 CA10Q9NS85 328 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 FBXL2Q9UKC9 423 aa10.34□□□□□ -0.75
PTPN2-201ENST00000309660 PHF3Q92576 2039 aaKnown RBP10.34□□□□□ -0.75
PTPN2-201ENST00000309660 AHCTF1Q8WYP5 2266 aa10.33□□□□□ -0.75
PTPN2-201ENST00000309660 FREM2Q5SZK8 3169 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 NCOR1O75376 2440 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 CELSR3Q9NYQ7 3312 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 A0A1B0GVI7 797 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 MASP2O00187 686 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 SULT1B1O43704 296 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 CREBL2O60519 120 aaPredicted RBP10.33□□□□□ -0.76
PTPN2-201ENST00000309660 ALX3O95076 343 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 SULT1A3P0DMM9 295 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 SULT1A4P0DMN0 295 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 HTR2CP28335 458 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 FAUP35544 74 aaKnown RBP10.33□□□□□ -0.76
PTPN2-201ENST00000309660 ASPHD2Q6ICH7 369 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 NLRC3Q7RTR2 1065 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 BIVMQ86UB2 503 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 LIX1LQ8IVB5 337 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 ACBD4Q8NC06 268 aa10.33□□□□□ -0.76
PTPN2-201ENST00000309660 CHST4Q8NCG5 386 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms