RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 GAAP10253 952 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 LSM11P83369 360 aaKnown RBP eCLIP10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 DGCR2P98153 550 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 EBPQ15125 230 aaKnown RBP10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 FAM76BQ5HYJ3 339 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 BTLAQ7Z6A9 289 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC7A6Q92536 515 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 CDX2Q99626 313 aaPredicted RBP10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 CMSS1Q9BQ75 279 aaKnown RBP10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 SARGQ9BW04 601 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 SRRQ9GZT4 340 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 LHX9Q9NQ69 397 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLCO1C1Q9NYB5 712 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 LRFN1Q9P244 771 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 HDGFL3Q9Y3E1 203 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF175Q9Y473 711 aa10.35□□□□□ -0.75
PCDHGC3-201ENST00000308177 A0A0B4J203 849 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF587BE7ETH6 402 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 HRKO00198 91 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 HYAL3O43820 417 aaPredicted RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ABHD16AO95870 558 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 GCH1P30793 250 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 AKR1D1P51857 326 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 DOC2BQ14184 412 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 PPA1Q15181 289 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF684Q5T5D7 378 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZAR1Q86SH2 424 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 PDZD9Q8IXQ8 264 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC22A18ASQ8N1D0 253 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR52I2Q8NH67 350 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ORAI1Q96D31 301 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 GON7Q9BXV9 100 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 PTTG3PQ9NZH4 202 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 HRH3Q9Y5N1 445 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 GREB1Q4ZG55 1949 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 NTN1O95631 604 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 S100A6P06703 90 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 APEHP13798 732 aaKnown RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 NAGAP17050 411 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 CX3CR1P49238 355 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 TRA2AQ13595 282 aaKnown RBP eCLIP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 BAK1Q16611 211 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 EXOSC6Q5RKV6 272 aaKnown RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 Q7L0L9 218 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 UCK1Q9HA47 277 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 FBXL4Q9UKA2 621 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 TMEM265A0A087WTH1 108 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 SGCEO43556 437 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 EIF4EP06730 217 aaKnown RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 CDK2P24941 298 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 SLC25A1P53007 311 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 GLIPR1L1Q6UWM5 242 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 STAC2Q6ZMT1 411 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 C16orf47Q6ZP98 133 aaPredicted RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 SULF2Q8IWU5 870 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ELMOD2Q8IZ81 293 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR4D9Q8NGE8 314 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR2I1PQ8NGU4 316 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 OR51E1Q8TCB6 317 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 DVL3Q92997 716 aaPredicted RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ABHD6Q9BV23 337 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 EXOGQ9Y2C4 368 aaKnown RBP10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 SPEF1Q9Y4P9 236 aa10.34□□□□□ -0.75
PCDHGC3-201ENST00000308177 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 TRAPPC2LH3BP13 241 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 FABP7O15540 132 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 IGHV3-9P01782 118 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 ITGB2P05107 769 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 ETV6P41212 452 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 TAS2R46P59540 309 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 SEC61A1P61619 476 aaKnown RBP10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 PMPCAQ10713 525 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 BEND4Q6ZU67 534 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 DOK3Q7L591 496 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 ANKRD37Q7Z713 158 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 CCDC28AQ8IWP9 274 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 PELI1Q96FA3 418 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 SNX18Q96RF0 628 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 ATF6BQ99941 703 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 IER2Q9BTL4 223 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 FLRT3Q9NZU0 649 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 B3GALT1Q9Y5Z6 326 aa10.33□□□□□ -0.75
PCDHGC3-201ENST00000308177 A0A087WZY1 265 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 TRIM64CA6NLI5 447 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 FOXS1O43638 330 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 GCM2O75603 506 aaPredicted RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 S100A9P06702 114 aaKnown RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 EPXP11678 715 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 ZNF44P15621 663 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 HOXB9P17482 250 aaPredicted RBP10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 CPT2P23786 658 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 ADH6P28332 368 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 BTG1P62324 171 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 FUT7Q11130 342 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 CDC20Q12834 499 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 PRSS53Q2L4Q9 553 aa10.33□□□□□ -0.76
PCDHGC3-201ENST00000308177 PWWP2BQ6NUJ5 590 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms