RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ZBTB46Q86UZ6 589 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 OR6V1Q8N148 313 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 MUC15Q8N387 334 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 OR9Q1Q8NGQ5 310 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 OR6K6Q8NGW6 343 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 LILRB1Q8NHL6 650 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 FGFBP3Q8TAT2 258 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 C11orf40Q8WZ69 217 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 CDADC1Q9BWV3 514 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 OR2H1Q9GZK4 316 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 BEX4Q9NWD9 120 aaPredicted RBP9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 NDRG4Q9ULP0 352 aaKnown RBP9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 LAMP3Q9UQV4 416 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 AKAP6Q13023 2319 aa9.54□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 ANKRD17O75179 2603 aaKnown RBP9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 PLCE1Q9P212 2302 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 FAM171A2A8MVW0 826 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 E7EQL1 145 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 DCTN6O00399 190 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 SURF4O15260 269 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 SGCEO43556 437 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 SMPD2O60906 423 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 GPANK1O95872 356 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 GAAP10253 952 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 CD53P19397 219 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 STOMP27105 288 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 APEX1P27695 318 aaKnown RBP9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 FMO3P31513 532 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 PYCR1P32322 319 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 TTKP33981 857 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 HTR5AP47898 357 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 GDI2P50395 445 aaKnown RBP9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 BLVRAP53004 296 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 SLC25A1P53007 311 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 RAD23AP54725 363 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 ADAM8P78325 824 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 CDK5Q00535 292 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 PSG4Q00888 419 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 TEKQ02763 1124 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 SNAPC1Q16533 368 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 MEP1BQ16820 701 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 DEFB113Q30KQ7 82 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 UGT2A3Q6UWM9 527 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 ZNF584Q8IVC4 421 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 PQLC1Q8N2U9 271 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 NUP37Q8NFH4 326 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 OR2AJ1Q8NGZ0 328 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 AKR7LQ8NHP1 331 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 MBD6Q96DN6 1003 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 ZNF75AQ96N20 296 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 CIB1Q99828 191 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 C9orf16Q9BUW7 83 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 RIBC2Q9H4K1 309 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 CA10Q9NS85 328 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 CBLN4Q9NTU7 201 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 PLEK2Q9NYT0 353 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 TVP23BQ9NYZ1 205 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 ASH2LQ9UBL3 628 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 EIF3KQ9UBQ5 218 aaKnown RBP9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 KCNG2Q9UJ96 466 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 UNC79Q9P2D8 2635 aa9.53□□□□□ -0.88
CSPG4P2Y-201ENST00000306853 C5orf49A4QMS7 147 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 FAM183AA6NL82 134 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ANKRD65E5RJM6 399 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 EI24O14681 340 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 MITFO75030 526 aaPredicted RBP9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 MPZL1O95297 269 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SNAP29O95721 258 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SCG5P05408 212 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GYPBP06028 91 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ROS1P08922 2347 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 COX5BP10606 129 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 BMP4P12644 408 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CCL2P13500 99 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SPI1P17947 270 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ART1P52961 327 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 RPS7P62081 194 aaKnown RBP9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PPP2R2BQ00005 443 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 PTGES3Q15185 160 aaKnown RBP9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 KCNMB1Q16558 191 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TMEM236Q5W0B7 351 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ACSM5Q6NUN0 579 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ZNF774Q6NX45 483 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ARL9Q6T311 187 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 DTX2Q86UW9 622 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 GJC3Q8NFK1 279 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SLC26A10Q8NG04 563 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OR51L1Q8NGJ5 315 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TRMT61AQ96FX7 289 aaKnown RBP9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 WNT5BQ9H1J7 359 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 OR51V1Q9H2C8 321 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ZNF442Q9H7R0 627 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CMAHPQ9Y471 501 aa9.52□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 CELSR2Q9HCU4 2923 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 TVP23AA6NH52 213 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 ZAR1LA6NP61 321 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 LCKP06239 509 aa9.51□□□□□ -0.89
CSPG4P2Y-201ENST00000306853 SOD3P08294 240 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms